RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 TBC1D9BQ66K14 1250 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 CCDC102BQ68D86 513 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 NBPF5PQ86XG9 351 aaPredicted RBP17.35■□□□□ 0.37
IFT43-209ENST00000555305 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
IFT43-209ENST00000555305 NDUFB9Q9Y6M9 179 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 C4BP0C0L5 1744 aa17.35■□□□□ 0.37
IFT43-209ENST00000555305 AK2P54819 239 aa17.34■□□□□ 0.37
IFT43-209ENST00000555305 ARAP2Q8WZ64 1704 aa17.34■□□□□ 0.37
IFT43-209ENST00000555305 APPBP2Q92624 585 aa17.34■□□□□ 0.37
IFT43-209ENST00000555305 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
IFT43-209ENST00000555305 FAM182BQ5T319 152 aa17.33■□□□□ 0.37
IFT43-209ENST00000555305 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.37
IFT43-209ENST00000555305 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.37
IFT43-209ENST00000555305 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.36
IFT43-209ENST00000555305 CYP2E1P05181 493 aaPredicted RBP17.33■□□□□ 0.36
IFT43-209ENST00000555305 MCAMP43121 646 aa17.33■□□□□ 0.36
IFT43-209ENST00000555305 ZAP70P43403 619 aa17.33■□□□□ 0.36
IFT43-209ENST00000555305 KCNQ4P56696 695 aa17.33■□□□□ 0.36
IFT43-209ENST00000555305 SKOR2Q2VWA4 1001 aaPredicted RBP17.33■□□□□ 0.36
IFT43-209ENST00000555305 UBE3CQ15386 1083 aa17.32■□□□□ 0.36
IFT43-209ENST00000555305 GNL3LQ9NVN8 582 aaKnown RBP17.32■□□□□ 0.36
IFT43-209ENST00000555305 TAF1LQ8IZX4 1826 aa17.32■□□□□ 0.36
IFT43-209ENST00000555305 CARMIL3Q8ND23 1372 aa17.32■□□□□ 0.36
IFT43-209ENST00000555305 MAST3O60307 1309 aa17.31■□□□□ 0.36
IFT43-209ENST00000555305 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
IFT43-209ENST00000555305 RBM6P78332 1123 aaKnown RBP17.31■□□□□ 0.36
IFT43-209ENST00000555305 CHRNDQ07001 517 aa17.31■□□□□ 0.36
IFT43-209ENST00000555305 UBE4AQ14139 1066 aa17.31■□□□□ 0.36
IFT43-209ENST00000555305 ADCK5Q3MIX3 580 aa17.31■□□□□ 0.36
IFT43-209ENST00000555305 WASHC4Q2M389 1173 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 BICDL1Q6ZP65 573 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
IFT43-209ENST00000555305 SPATA5Q8NB90 893 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 CHMP4CQ96CF2 233 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 SEC62Q99442 399 aaKnown RBP17.3■□□□□ 0.36
IFT43-209ENST00000555305 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
IFT43-209ENST00000555305 MAP3K12Q12852 859 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 SCARF1Q14162 830 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 GSE1Q14687 1217 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
IFT43-209ENST00000555305 ADD2P35612 726 aa17.29■□□□□ 0.36
IFT43-209ENST00000555305 PHKA1P46020 1223 aa17.29■□□□□ 0.36
IFT43-209ENST00000555305 CCDC129Q6ZRS4 1044 aa17.29■□□□□ 0.36
IFT43-209ENST00000555305 SRP68Q9UHB9 627 aaKnown RBP17.29■□□□□ 0.36
IFT43-209ENST00000555305 ZBTB22O15209 634 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 NPHP1O15259 732 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 WDR33Q9C0J8 1336 aaKnown RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 CYP21A2P08686 494 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 RPS8P62241 208 aaKnown RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 IMMTQ16891 758 aaKnown RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 CAVIN4Q5BKX8 364 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 TMED8Q6PL24 325 aaPredicted RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 HELBQ8NG08 1087 aaPredicted RBP17.28■□□□□ 0.36
IFT43-209ENST00000555305 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
IFT43-209ENST00000555305 SEMA3EO15041 775 aa17.27■□□□□ 0.35
IFT43-209ENST00000555305 IGSF3O75054 1194 aa17.27■□□□□ 0.35
IFT43-209ENST00000555305 M0R2C6 588 aa17.26■□□□□ 0.35
IFT43-209ENST00000555305 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
IFT43-209ENST00000555305 ZNF804BA4D1E1 1349 aa17.26■□□□□ 0.35
IFT43-209ENST00000555305 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
IFT43-209ENST00000555305 IDH1O75874 414 aaKnown RBP17.25■□□□□ 0.35
IFT43-209ENST00000555305 BAG4O95429 457 aaKnown RBP17.25■□□□□ 0.35
IFT43-209ENST00000555305 BRD1O95696 1058 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 DHX32Q7L7V1 743 aaKnown RBP17.25■□□□□ 0.35
IFT43-209ENST00000555305 CNBD1Q8NA66 436 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 LRRC4BQ9NT99 713 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 MINPP1Q9UNW1 487 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 C4AP0C0L4 1744 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 GPAA1O43292 621 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 TRAK2O60296 914 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 PHF14O94880 888 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
IFT43-209ENST00000555305 PDS5AQ29RF7 1337 aaKnown RBP17.25■□□□□ 0.35
IFT43-209ENST00000555305 PDE6AP16499 860 aa17.24■□□□□ 0.35
IFT43-209ENST00000555305 DEKP35659 375 aaKnown RBP17.24■□□□□ 0.35
IFT43-209ENST00000555305 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
IFT43-209ENST00000555305 FBXL16Q8N461 479 aa17.24■□□□□ 0.35
IFT43-209ENST00000555305 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
IFT43-209ENST00000555305 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
IFT43-209ENST00000555305 PLSCR1O15162 318 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 TRIM37O94972 964 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 CPA1P15085 419 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 GNAT2P19087 354 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 PDCP20941 246 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 NFIXQ14938 502 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 VPS37DQ86XT2 251 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 DENND2AQ9ULE3 1009 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 CHGBP05060 677 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 ST5P78524 1137 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 FGD1P98174 961 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 AIDAQ96BJ3 306 aa17.23■□□□□ 0.35
IFT43-209ENST00000555305 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms