RNA–Protein interactions for RNA: ENST00000555094.5

GABRB3-208, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,494 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-208ENST00000555094 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 RAD50Q92878 1312 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 HIP1O00291 1037 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 GOLIM4O00461 696 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 HOXA10P31260 410 aaPredicted RBP13.16□□□□□ -0.3
GABRB3-208ENST00000555094 CCDC102BQ68D86 513 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 CCDC125Q86Z20 511 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
GABRB3-208ENST00000555094 IPO9Q96P70 1041 aaKnown RBP13.16□□□□□ -0.3
GABRB3-208ENST00000555094 PARP3Q9Y6F1 533 aa13.16□□□□□ -0.3
GABRB3-208ENST00000555094 DLEC1Q9Y238 1755 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 A0A0D9SFI3 127 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 MCAMP43121 646 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 NMIQ13287 307 aaPredicted RBP13.15□□□□□ -0.3
GABRB3-208ENST00000555094 UBE4AQ14139 1066 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
GABRB3-208ENST00000555094 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 SLC51AQ86UW1 340 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
GABRB3-208ENST00000555094 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
GABRB3-208ENST00000555094 ZNF804BA4D1E1 1349 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 TICAM2Q86XR7 235 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 RUFY2Q8WXA3 655 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 RBM17Q96I25 401 aaKnown RBP13.14□□□□□ -0.31
GABRB3-208ENST00000555094 KIF2CQ99661 725 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 ANO2Q9NQ90 1003 aa13.14□□□□□ -0.31
GABRB3-208ENST00000555094 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-208ENST00000555094 ZAP70P43403 619 aa13.13□□□□□ -0.31
GABRB3-208ENST00000555094 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
GABRB3-208ENST00000555094 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
GABRB3-208ENST00000555094 ANKRD2Q9GZV1 360 aa13.13□□□□□ -0.31
GABRB3-208ENST00000555094 LSG1Q9H089 658 aaKnown RBP13.13□□□□□ -0.31
GABRB3-208ENST00000555094 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
GABRB3-208ENST00000555094 KIF13BQ9NQT8 1826 aa13.12□□□□□ -0.31
GABRB3-208ENST00000555094 EPB41L2O43491 1005 aaKnown RBP13.12□□□□□ -0.31
GABRB3-208ENST00000555094 CHGBP05060 677 aa13.12□□□□□ -0.31
GABRB3-208ENST00000555094 RASGRF1Q13972 1273 aa13.12□□□□□ -0.31
GABRB3-208ENST00000555094 MAST2Q6P0Q8 1798 aa13.12□□□□□ -0.31
GABRB3-208ENST00000555094 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
GABRB3-208ENST00000555094 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
GABRB3-208ENST00000555094 KLRK1P26718 216 aa13.11□□□□□ -0.31
GABRB3-208ENST00000555094 BCAMP50895 628 aa13.11□□□□□ -0.31
GABRB3-208ENST00000555094 FKBP4Q02790 459 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABRB3-208ENST00000555094 HMG20BQ9P0W2 317 aa13.11□□□□□ -0.31
GABRB3-208ENST00000555094 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
GABRB3-208ENST00000555094 CYP2E1P05181 493 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-208ENST00000555094 SRGNP10124 158 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
GABRB3-208ENST00000555094 PIH1D3Q9NQM4 214 aaKnown RBP13.1□□□□□ -0.31
GABRB3-208ENST00000555094 XDHP47989 1333 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 KIAA1551Q9HCM1 1747 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 RNF113AO15541 343 aaKnown RBP13.1□□□□□ -0.31
GABRB3-208ENST00000555094 BBOX1O75936 387 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 NPR1P16066 1061 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 PDE6BP35913 854 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 GYG1P46976 350 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 KCNJ4P48050 445 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 SPATA5Q8NB90 893 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
GABRB3-208ENST00000555094 PPEF1O14829 653 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-208ENST00000555094 GPSM2P81274 684 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 PTH1RQ03431 593 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-208ENST00000555094 SLFNL1Q499Z3 407 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 KIAA1211Q6ZU35 1233 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 TMC4Q7Z404 712 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 FBXO33Q7Z6M2 555 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 FAM84BQ96KN1 310 aaPredicted RBP13.09□□□□□ -0.31
GABRB3-208ENST00000555094 PALD1Q9ULE6 856 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 SLX4Q8IY92 1834 aa13.09□□□□□ -0.31
GABRB3-208ENST00000555094 MAST3O60307 1309 aa13.08□□□□□ -0.31
GABRB3-208ENST00000555094 ZFYP08048 801 aaPredicted RBP13.08□□□□□ -0.32
GABRB3-208ENST00000555094 MCCP23508 829 aa13.08□□□□□ -0.32
GABRB3-208ENST00000555094 HSPA4P34932 840 aa13.08□□□□□ -0.32
GABRB3-208ENST00000555094 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
GABRB3-208ENST00000555094 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
GABRB3-208ENST00000555094 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
GABRB3-208ENST00000555094 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
GABRB3-208ENST00000555094 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
GABRB3-208ENST00000555094 ANAPC15P60006 121 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 LRRFIP1Q32MZ4 808 aaKnown RBP13.07□□□□□ -0.32
GABRB3-208ENST00000555094 MCMDC2Q4G0Z9 681 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 CAVIN4Q5BKX8 364 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 CCDC129Q6ZRS4 1044 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 C15orf52Q6ZUT6 534 aaKnown RBP13.07□□□□□ -0.32
GABRB3-208ENST00000555094 C2CD5Q86YS7 1000 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 MASTLQ96GX5 879 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 GNL3LQ9NVN8 582 aaKnown RBP13.07□□□□□ -0.32
GABRB3-208ENST00000555094 PODXL2Q9NZ53 605 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
GABRB3-208ENST00000555094 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
GABRB3-208ENST00000555094 M0R2C6 588 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms