RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 HMGN5P82970 282 aaKnown RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 GUCY1B3Q02153 619 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 PUS3Q9BZE2 481 aaKnown RBP8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 C19orf44Q9H6X5 657 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 TMEM94Q12767 1356 aa8.17□□□□□ -1.1
LINC-ROR-201ENST00000553704 E7EWF7 191 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 FOXP2O15409 715 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 A1BGP04217 495 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 ADRA2BP18089 450 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 CCDC144BQ3MJ40 725 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 HSP90AB3PQ58FF7 597 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZMYM1Q5SVZ6 1142 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 USP28Q96RU2 1077 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 MYH7P12883 1935 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 ECM29Q5VYK3 1845 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 HSPD1P10809 573 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 PDIA4P13667 645 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZNF165P49910 485 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 FGD1P98174 961 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 EXOSC10Q01780 885 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 DHX32Q7L7V1 743 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 ERCC4Q92889 916 aaPredicted RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 MAP7D2Q96T17 732 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 C4AP0C0L4 1744 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 C4BP0C0L5 1744 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 RIOK3O14730 519 aaKnown RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 DSCC1Q9BVC3 393 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 AGXT2Q9BYV1 514 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 TRIM5Q9C035 493 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 BCL2L12Q9HB09 334 aa8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 NAP1L2Q9ULW6 460 aaPredicted RBP8.16□□□□□ -1.1
LINC-ROR-201ENST00000553704 MYO5AQ9Y4I1 1855 aaKnown RBP8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 CARMIL3Q8ND23 1372 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 A0A1B0GUL7 405 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 ADORA1P30542 326 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 ARID5BQ14865 1188 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 IQCB1Q15051 598 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZSCAN25Q6NSZ9 544 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 ZSCAN16Q9H4T2 348 aaPredicted RBP8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 HELLSQ9NRZ9 838 aa8.15□□□□□ -1.1
LINC-ROR-201ENST00000553704 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 EYA2O00167 538 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 IFIT1P09914 478 aaKnown RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 PDIA3P30101 505 aaKnown RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 HAND2P61296 217 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 SNW1Q13573 536 aaKnown RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 SCARF1Q14162 830 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 OTUD7BQ6GQQ9 843 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 NAA16Q6N069 864 aaPredicted RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 RAB11FIP4Q86YS3 637 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 OSBP2Q969R2 916 aa8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 CCDC85AQ96PX6 553 aaPredicted RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 LLPHQ9BRT6 129 aaKnown RBP8.15□□□□□ -1.11
LINC-ROR-201ENST00000553704 XIRP1Q702N8 1843 aaKnown RBP8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 TPM3P06753 285 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 IL15P40933 162 aaPredicted RBP8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 PI16Q6UXB8 463 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 DRC7Q8IY82 874 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 CACTINQ8WUQ7 758 aaKnown RBP8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 C16orf45Q96MC5 204 aaPredicted RBP8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 KIF3AQ9Y496 699 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 ABCA3Q99758 1704 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 RNF113AO15541 343 aaKnown RBP8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 ATF3P18847 181 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 ENGASEQ8NFI3 743 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 GPR108Q9NPR9 543 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 GJB4Q9NTQ9 266 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 CLIP2Q9UDT6 1046 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 RCOR1Q9UKL0 485 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 CFAP45Q9UL16 551 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 RIC1Q4ADV7 1423 aa8.14□□□□□ -1.11
LINC-ROR-201ENST00000553704 CPDO75976 1380 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 AKAP11Q9UKA4 1901 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 NEDD4P46934 1319 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 HMGB1P09429 215 aaKnown RBP8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 PLEKHG2Q9H7P9 1386 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 SPATA31A3Q5VYP0 1347 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 FKBP4Q02790 459 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 STX1AQ16623 288 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 DHX40Q8IX18 779 aaKnown RBP8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 FSIP1Q8NA03 581 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 PRDM10Q9NQV6 1147 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 DENND2AQ9ULE3 1009 aa8.13□□□□□ -1.11
LINC-ROR-201ENST00000553704 COL5A2P05997 1499 aaPredicted RBP8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 PCDH11XQ9BZA7 1347 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 PCDH11YQ9BZA8 1340 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 DCCP43146 1447 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 USP27XA6NNY8 438 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 ANTXR2P58335 489 aa8.12□□□□□ -1.11
LINC-ROR-201ENST00000553704 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms