RNA–Protein interactions for RNA: ENST00000552681.1

GNPTAB-210, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 1 (best)

Gene GNPTAB, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-210ENST00000552681 UBR7Q8N806 425 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 ZNF713Q8N859 430 aaPredicted RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 SMAD5Q99717 465 aaKnown RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 EIF2AK1Q9BQI3 630 aaKnown RBP10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 SIRPGQ9P1W8 387 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 MAFFQ9ULX9 164 aa10.35□□□□□ -0.75
GNPTAB-210ENST00000552681 KCNQ2O43526 872 aa10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 SSBP05455 408 aaKnown RBP eCLIP10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 NCAM1P13591 858 aa10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 PUM3Q15397 648 aaKnown RBP10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 OR8H2Q8N162 312 aa10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 SPDYE1Q8NFV5 336 aaPredicted RBP10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 EEA1Q15075 1411 aa10.34□□□□□ -0.75
GNPTAB-210ENST00000552681 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 ECEL1O95672 775 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 EHHADHQ08426 723 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 CENPTQ96BT3 561 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 VMP1Q96GC9 406 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 RBCK1Q9BYM8 510 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 SAGE1Q9NXZ1 904 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 C19orf81C9J6K1 198 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 APPL2Q8NEU8 664 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 SCLT1Q96NL6 688 aa10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
GNPTAB-210ENST00000552681 TRIM6-TRIM34B2RNG4 842 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 RAB33AQ14088 237 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 C2orf49Q9BVC5 232 aaPredicted RBP10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 TMEM260Q9NX78 707 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 RASSF10A6NK89 507 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 VAMP4O75379 141 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 EIF4G2P78344 907 aaKnown RBP eCLIP10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 DSC3Q14574 896 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 FAM133BQ5BKY9 247 aaKnown RBP10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 WDR45BQ5MNZ6 344 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 KIAA1614Q5VZ46 1190 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 ZNF449Q6P9G9 518 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 C16orf86Q6ZW13 317 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 KRT26Q7Z3Y9 468 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 SH3KBP1Q96B97 665 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 GPRASP2Q96D09 838 aa10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 MORC2Q9Y6X9 1032 aaPredicted RBP10.32□□□□□ -0.76
GNPTAB-210ENST00000552681 KLF4O43474 513 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 TPM2P07951 284 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 RGS3P49796 1198 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 CLDN10P78369 228 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 PPP2R5BQ15173 497 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 MMS22LQ6ZRQ5 1243 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 CATIPQ7Z7H3 387 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 IPCEF1Q8WWN9 437 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 UPF1Q92900 1129 aaKnown RBP eCLIP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 DNAJB2P25686 324 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 ENAHQ8N8S7 591 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 ZFPM2Q8WW38 1151 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 SYMPKQ92797 1274 aaKnown RBP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 SNX21Q969T3 373 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 ASPSCR1Q9BZE9 553 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 CNNM2Q9H8M5 875 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 GGT7Q9UJ14 662 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 CD2APQ9Y5K6 639 aa10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 MAGED1Q9Y5V3 778 aaPredicted RBP10.31□□□□□ -0.76
GNPTAB-210ENST00000552681 SMTNL1A8MU46 457 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 SNX16P57768 344 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 NR1H3Q13133 447 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 REM2Q8IYK8 340 aaPredicted RBP10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 RASGRP1O95267 797 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 PGRP06401 933 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 RENBPP51606 427 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 MLC1Q15049 377 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 DDB1Q16531 1140 aa10.3□□□□□ -0.76
GNPTAB-210ENST00000552681 GTPBP10A4D1E9 387 aaKnown RBP10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 SNAPC4Q5SXM2 1469 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 IQCEQ6IPM2 695 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 ZNF354CQ86Y25 554 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 IFNL2Q8IZJ0 200 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 TAF4BQ92750 862 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 PRKD2Q9BZL6 878 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 TSKSQ9UJT2 592 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 NOD1Q9Y239 953 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 PCDHGB3Q9Y5G1 929 aa10.29□□□□□ -0.76
GNPTAB-210ENST00000552681 GRIN2BQ13224 1484 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 SOGA1O94964 1423 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 GOLGA6L22H0YM25 854 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 UBA7P41226 1012 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 SFSWAPQ12872 951 aaKnown RBP10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 KIAA0825Q8IV33 1275 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 RPGRQ92834 1020 aaKnown RBP10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 CRELD1Q96HD1 420 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 PAIP2Q9BPZ3 127 aaKnown RBP10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 SLX1AQ9BQ83 275 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 SYNJ2O15056 1496 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 BAIAP3O94812 1187 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
GNPTAB-210ENST00000552681 KIF12Q96FN5 646 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms