RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 CD68P34810 354 aaPredicted RBP7.29□□□□□ -1.24
HCFC2-206ENST00000552343 UVSSAQ2YD98 709 aa7.29□□□□□ -1.24
HCFC2-206ENST00000552343 TREML1Q86YW5 311 aa7.29□□□□□ -1.24
HCFC2-206ENST00000552343 LRFN2Q9ULH4 789 aa7.29□□□□□ -1.24
HCFC2-206ENST00000552343 TM4SF5O14894 197 aa7.28□□□□□ -1.24
HCFC2-206ENST00000552343 FOXO3O43524 673 aa7.28□□□□□ -1.24
HCFC2-206ENST00000552343 TXNDC11Q6PKC3 985 aa7.28□□□□□ -1.24
HCFC2-206ENST00000552343 VTI1AQ96AJ9 217 aa7.28□□□□□ -1.24
HCFC2-206ENST00000552343 WEE1P30291 646 aa7.27□□□□□ -1.25
HCFC2-206ENST00000552343 KIAA1211Q6ZU35 1233 aa7.27□□□□□ -1.25
HCFC2-206ENST00000552343 SHKBP1Q8TBC3 707 aa7.27□□□□□ -1.25
HCFC2-206ENST00000552343 MYRFLQ96LU7 910 aa7.27□□□□□ -1.25
HCFC2-206ENST00000552343 TMEM164Q5U3C3 297 aa7.26□□□□□ -1.25
HCFC2-206ENST00000552343 CCER1Q8TC90 406 aaPredicted RBP7.26□□□□□ -1.25
HCFC2-206ENST00000552343 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
HCFC2-206ENST00000552343 TMEM88BA6NKF7 163 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 CDC25BP30305 580 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 ATP11AP98196 1134 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 DUOXA2Q1HG44 320 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 NLRP13Q86W25 1043 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 CLEC10AQ8IUN9 316 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 FAM20CQ8IXL6 584 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
HCFC2-206ENST00000552343 FAM83CQ9BQN1 747 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
HCFC2-206ENST00000552343 CDC27P30260 824 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 JAG1P78504 1218 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 COL13A1Q5TAT6 717 aaPredicted RBP7.24□□□□□ -1.25
HCFC2-206ENST00000552343 TMCO4Q5TGY1 634 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 ADAMTSL4Q6UY14 1074 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 STK32AQ8WU08 396 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 ZMIZ1Q9ULJ6 1067 aa7.24□□□□□ -1.25
HCFC2-206ENST00000552343 FSCN2O14926 492 aa7.23□□□□□ -1.25
HCFC2-206ENST00000552343 DDX3YO15523 660 aaKnown RBP7.23□□□□□ -1.25
HCFC2-206ENST00000552343 HOXA10P31260 410 aaPredicted RBP7.23□□□□□ -1.25
HCFC2-206ENST00000552343 TRIP4Q15650 581 aaPredicted RBP7.23□□□□□ -1.25
HCFC2-206ENST00000552343 UBASH3BQ8TF42 649 aa7.23□□□□□ -1.25
HCFC2-206ENST00000552343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.23□□□□□ -1.25
HCFC2-206ENST00000552343 ADAM11O75078 769 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 BMP3P12645 472 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 ATP2B4P23634 1241 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 COX20Q5RI15 118 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 BEND4Q6ZU67 534 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 ABI1Q8IZP0 508 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 OR13H1Q8NG92 308 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
HCFC2-206ENST00000552343 KCNF1Q9H3M0 494 aa7.22□□□□□ -1.25
HCFC2-206ENST00000552343 WDR64B1ANS9 1081 aa7.21□□□□□ -1.26
HCFC2-206ENST00000552343 SMNDC1O75940 238 aaKnown RBP eCLIP7.21□□□□□ -1.26
HCFC2-206ENST00000552343 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.21□□□□□ -1.26
HCFC2-206ENST00000552343 ETFBKMTQ8IXQ9 262 aa7.21□□□□□ -1.26
HCFC2-206ENST00000552343 SPACA7Q96KW9 195 aa7.21□□□□□ -1.26
HCFC2-206ENST00000552343 RASSF4Q9H2L5 321 aa7.21□□□□□ -1.26
HCFC2-206ENST00000552343 SART1O43290 800 aaKnown RBP7.2□□□□□ -1.26
HCFC2-206ENST00000552343 EPHA1P21709 976 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 PREPP48147 710 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 HYAL2Q12891 473 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 OGFOD2Q6N063 350 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 FAM117BQ6P1L5 589 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 COL26A1Q96A83 441 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 KLHDC7BQ96G42 594 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 KRTAP4-11Q9BYQ6 195 aa7.2□□□□□ -1.26
HCFC2-206ENST00000552343 GZF1Q9H116 711 aaPredicted RBP7.2□□□□□ -1.26
HCFC2-206ENST00000552343 SH2B1Q9NRF2 756 aaPredicted RBP7.2□□□□□ -1.26
HCFC2-206ENST00000552343 GNEQ9Y223 722 aaKnown RBP7.2□□□□□ -1.26
HCFC2-206ENST00000552343 UBAP1LF5GYI3 381 aa7.19□□□□□ -1.26
HCFC2-206ENST00000552343 MFSD14AQ96MC6 490 aa7.19□□□□□ -1.26
HCFC2-206ENST00000552343 PIM2Q9P1W9 311 aa7.19□□□□□ -1.26
HCFC2-206ENST00000552343 SSFA2P28290 1259 aa7.18□□□□□ -1.26
HCFC2-206ENST00000552343 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
HCFC2-206ENST00000552343 ANKRD34AQ69YU3 496 aa7.18□□□□□ -1.26
HCFC2-206ENST00000552343 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
HCFC2-206ENST00000552343 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
HCFC2-206ENST00000552343 FKBP5Q13451 457 aaPredicted RBP7.17□□□□□ -1.26
HCFC2-206ENST00000552343 HIF3AQ9Y2N7 669 aa7.17□□□□□ -1.26
HCFC2-206ENST00000552343 KIF4AO95239 1232 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 C8AP07357 584 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 SCNN1AP37088 669 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 TTC39BQ5VTQ0 682 aaPredicted RBP7.16□□□□□ -1.26
HCFC2-206ENST00000552343 KRTAP17-1Q9BYP8 105 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 ADAM19Q9H013 955 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 SAP130Q9H0E3 1048 aa7.16□□□□□ -1.26
HCFC2-206ENST00000552343 ANGEL1Q9UNK9 670 aaKnown RBP7.16□□□□□ -1.26
HCFC2-206ENST00000552343 PRMT3O60678 531 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 PTPRAP18433 802 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 BRD2P25440 801 aaKnown RBP7.15□□□□□ -1.26
HCFC2-206ENST00000552343 FAM69CQ0P6D2 419 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 CBLL1Q75N03 491 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 SND1Q7KZF4 910 aaKnown RBP eCLIP7.15□□□□□ -1.26
HCFC2-206ENST00000552343 PIK3R5Q8WYR1 880 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 RNF208Q9H0X6 261 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 ATG3Q9NT62 314 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 CXXC1Q9P0U4 656 aaPredicted RBP7.15□□□□□ -1.26
HCFC2-206ENST00000552343 CCDC39Q9UFE4 941 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 LEMD3Q9Y2U8 911 aa7.15□□□□□ -1.26
HCFC2-206ENST00000552343 CARNS1A5YM72 827 aa7.14□□□□□ -1.27
HCFC2-206ENST00000552343 F13BP05160 661 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms