RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 PROSER3Q2NL68 480 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 LRP10Q7Z4F1 713 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 RTKN2Q8IZC4 609 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 KRI1Q8N9T8 703 aaKnown RBP11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
ATP2B1-207ENST00000550716 ERVV-1B6SEH8 477 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 SLC10A3P09131 477 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 EPHX2P34913 555 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 MAP1SQ66K74 1059 aaPredicted RBP11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 ZNF34Q8IZ26 560 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 PNISRQ8TF01 805 aaKnown RBP11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 MTRQ99707 1265 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 HACL1Q9UJ83 578 aa11.5□□□□□ -0.57
ATP2B1-207ENST00000550716 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 FOXN1O15353 648 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 VEGFBP49765 207 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 KMT5BQ4FZB7 885 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 KIF6Q6ZMV9 814 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 PSMD1Q99460 953 aa11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 IBTKQ9P2D0 1353 aaPredicted RBP11.49□□□□□ -0.57
ATP2B1-207ENST00000550716 HOXA10P31260 410 aaPredicted RBP11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 KCNC4Q03721 635 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 NYXQ9GZU5 481 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 TSPYL4Q9UJ04 414 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 SCN4AP35499 1836 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 NUP98P52948 1817 aa11.48□□□□□ -0.57
ATP2B1-207ENST00000550716 MAPK8IP3Q9UPT6 1336 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 SCNN1DP51172 638 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 COPS2P61201 443 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 MDM2Q00987 491 aaPredicted RBP11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 KRT24Q2M2I5 525 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 GIGYF2Q6Y7W6 1299 aaKnown RBP11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 GPC2Q8N158 579 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 PCDHB3Q9Y5E6 796 aa11.47□□□□□ -0.57
ATP2B1-207ENST00000550716 ERBB4Q15303 1308 aa11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 NEFMP07197 916 aa11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 EIF2S2P20042 333 aaKnown RBP11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 EPS15P42566 896 aa11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
ATP2B1-207ENST00000550716 ABCC4O15439 1325 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 RIPK4P57078 832 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 LARGE2Q8N3Y3 721 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 IL21Q9HBE4 155 aa11.45□□□□□ -0.58
ATP2B1-207ENST00000550716 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 TRAF5O00463 557 aa11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 AOC3Q16853 763 aa11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 PNMA8AQ86V59 439 aaPredicted RBP11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 CCDC146Q8IYE0 955 aa11.44□□□□□ -0.58
ATP2B1-207ENST00000550716 PPIP5K2O43314 1243 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 ACTN4O43707 911 aaKnown RBP11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 HCLS1P14317 486 aaPredicted RBP11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 PARP10Q53GL7 1025 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 BLOC1S3Q6QNY0 202 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 XAGE3Q8WTP9 111 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 UTP14AQ9BVJ6 771 aaKnown RBP11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 COL4A1P02462 1669 aa11.43□□□□□ -0.58
ATP2B1-207ENST00000550716 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 SLC10A5Q5PT55 438 aa11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 DIEXFQ68CQ4 756 aaKnown RBP11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 PPP1R42Q7Z4L9 355 aa11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 NLRP3Q96P20 1036 aa11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 DDX21Q9NR30 783 aaKnown RBP eCLIP11.42□□□□□ -0.58
ATP2B1-207ENST00000550716 DUOX1Q9NRD9 1551 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 SHTN1A0MZ66 631 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 LMOD1P29536 600 aaPredicted RBP11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 LBX1P52954 281 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 CXCL9Q07325 125 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 ABT1Q9ULW3 272 aaKnown RBP11.41□□□□□ -0.58
ATP2B1-207ENST00000550716 WDR33Q9C0J8 1336 aaKnown RBP11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 CLCN1P35523 988 aa11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 CTCFP49711 727 aaPredicted RBP11.4□□□□□ -0.58
ATP2B1-207ENST00000550716 GMPSP49915 693 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms