RNA–Protein interactions for RNA: ENST00000550659.1

PRDM4-206, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-206ENST00000550659 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
PRDM4-206ENST00000550659 CROCC2H7BZ55 1655 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 DNMT1P26358 1616 aaKnown RBP8.37□□□□□ -1.07
PRDM4-206ENST00000550659 ARHGEF5Q12774 1597 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 CFAP74Q9C0B2 1584 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 TTLL8A6PVC2 850 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 TNNI2P48788 182 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 ZNF394Q53GI3 561 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 USP48Q86UV5 1035 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 PMEPA1Q969W9 287 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
PRDM4-206ENST00000550659 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 TEX14Q8IWB6 1497 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 POGZQ7Z3K3 1410 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
PRDM4-206ENST00000550659 POTECB2RU33 542 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 USP17L7P0C7H9 530 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 RHOQP17081 205 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 RACK1P63244 317 aaKnown RBP8.36□□□□□ -1.07
PRDM4-206ENST00000550659 SAMD5Q5TGI4 173 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 NLRP13Q86W25 1043 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 FAM177A1Q8N128 213 aaPredicted RBP8.36□□□□□ -1.07
PRDM4-206ENST00000550659 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 SUV39H2Q9H5I1 410 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 SRA1Q9HD15 236 aaKnown RBP8.36□□□□□ -1.07
PRDM4-206ENST00000550659 GGT7Q9UJ14 662 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 INPP5FQ9Y2H2 1132 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 SIGLEC1Q9BZZ2 1709 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 DAPK1P53355 1430 aa8.36□□□□□ -1.07
PRDM4-206ENST00000550659 KDM5CP41229 1560 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 DENND4BO75064 1496 aaPredicted RBP8.35□□□□□ -1.07
PRDM4-206ENST00000550659 EREGO14944 169 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 POLR3DP05423 398 aaPredicted RBP8.35□□□□□ -1.07
PRDM4-206ENST00000550659 ATP2B1P20020 1258 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 VEGFBP49765 207 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 NXPE4Q6UWF7 544 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 NLRP8Q86W28 1048 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 C1orf127Q8N9H9 656 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 CNTN3Q9P232 1028 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 PCDHGB7Q9Y5F8 929 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 YEATS2Q9ULM3 1422 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 KIDINS220Q9ULH0 1771 aa8.35□□□□□ -1.07
PRDM4-206ENST00000550659 INO80Q9ULG1 1556 aaPredicted RBP8.35□□□□□ -1.07
PRDM4-206ENST00000550659 SOS2Q07890 1332 aaPredicted RBP8.34□□□□□ -1.07
PRDM4-206ENST00000550659 CCDC141Q6ZP82 1450 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 KDM6BO15054 1643 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 GADD45BO75293 160 aaPredicted RBP8.34□□□□□ -1.07
PRDM4-206ENST00000550659 KCNQ4P56696 695 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 SCARF1Q14162 830 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 BRD7Q9NPI1 651 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
PRDM4-206ENST00000550659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.34□□□□□ -1.075e-6■■■■■ 46.2
PRDM4-206ENST00000550659 ZFYVE16Q7Z3T8 1539 aa8.34□□□□□ -1.08
PRDM4-206ENST00000550659 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 ABCA6Q8N139 1617 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 F11P03951 625 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 CES1P23141 567 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
PRDM4-206ENST00000550659 ARID5AQ03989 594 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 TTC39BQ5VTQ0 682 aaPredicted RBP8.33□□□□□ -1.08
PRDM4-206ENST00000550659 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 ERMP1Q7Z2K6 904 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 ZMYM4Q5VZL5 1548 aa8.33□□□□□ -1.08
PRDM4-206ENST00000550659 MAST1Q9Y2H9 1570 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 C9orf84Q5VXU9 1444 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 GSTT1P30711 240 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
PRDM4-206ENST00000550659 GRM2Q14416 872 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 LBRQ14739 615 aaKnown RBP8.32□□□□□ -1.08
PRDM4-206ENST00000550659 RUBCNLQ9H714 662 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 CUEDC1Q9NWM3 386 aaPredicted RBP8.32□□□□□ -1.08
PRDM4-206ENST00000550659 TRAK1Q9UPV9 953 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 ADGBQ8N7X0 1667 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 ZNF518AQ6AHZ1 1483 aa8.32□□□□□ -1.08
PRDM4-206ENST00000550659 HECW2Q9P2P5 1572 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 DIP2CQ9Y2E4 1556 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 ATP7AQ04656 1500 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 FIGNL2A6NMB9 653 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 AVPP01185 164 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 GJA8P48165 433 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 DPH6Q7L8W6 267 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 VPS37DQ86XT2 251 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 SPATA32Q96LK8 384 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 PUS7Q96PZ0 661 aaKnown RBP8.31□□□□□ -1.08
PRDM4-206ENST00000550659 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
PRDM4-206ENST00000550659 ZCCHC2Q9C0B9 1178 aaKnown RBP8.31□□□□□ -1.08
PRDM4-206ENST00000550659 PPP4R2Q9NY27 417 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 KCNH4Q9UQ05 1017 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 SHANK2Q9UPX8 1470 aa8.31□□□□□ -1.08
PRDM4-206ENST00000550659 HMGB1P09429 215 aaKnown RBP8.3□□□□□ -1.08
PRDM4-206ENST00000550659 EDN3P14138 238 aa8.3□□□□□ -1.08
PRDM4-206ENST00000550659 EFHC2Q5JST6 749 aa8.3□□□□□ -1.08
PRDM4-206ENST00000550659 DHX38Q92620 1227 aaKnown RBP8.3□□□□□ -1.08
PRDM4-206ENST00000550659 DNAJC2Q99543 621 aaKnown RBP8.3□□□□□ -1.08
PRDM4-206ENST00000550659 RRP7BPQ9NSQ0 103 aa8.3□□□□□ -1.08
PRDM4-206ENST00000550659 ADGRL2O95490 1459 aa8.3□□□□□ -1.08
PRDM4-206ENST00000550659 MLH3Q9UHC1 1453 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms