RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
PDE1B-206ENST00000550285 PALD1Q9ULE6 856 aa17.59■□□□□ 0.41
PDE1B-206ENST00000550285 ZNF589Q86UQ0 364 aaPredicted RBP17.58■□□□□ 0.4
PDE1B-206ENST00000550285 GYG1P46976 350 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 IQSEC3Q9UPP2 1182 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-206ENST00000550285 MYO5AQ9Y4I1 1855 aaKnown RBP17.57■□□□□ 0.4
PDE1B-206ENST00000550285 HIP1O00291 1037 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 EIF5BO60841 1220 aaKnown RBP17.57■□□□□ 0.4
PDE1B-206ENST00000550285 CYP2E1P05181 493 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-206ENST00000550285 ARID4AP29374 1257 aaPredicted RBP17.57■□□□□ 0.4
PDE1B-206ENST00000550285 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
PDE1B-206ENST00000550285 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
PDE1B-206ENST00000550285 ZNF512BQ96KM6 892 aaPredicted RBP17.56■□□□□ 0.4
PDE1B-206ENST00000550285 TBC1D2Q9BYX2 928 aa17.56■□□□□ 0.4
PDE1B-206ENST00000550285 HMG20BQ9P0W2 317 aa17.56■□□□□ 0.4
PDE1B-206ENST00000550285 GOLGB1Q14789 3259 aaKnown RBP17.56■□□□□ 0.4
PDE1B-206ENST00000550285 KLRG2A4D1S0 409 aaPredicted RBP17.55■□□□□ 0.4
PDE1B-206ENST00000550285 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
PDE1B-206ENST00000550285 UBE4AQ14139 1066 aa17.55■□□□□ 0.4
PDE1B-206ENST00000550285 PIH1D3Q9NQM4 214 aaKnown RBP17.55■□□□□ 0.4
PDE1B-206ENST00000550285 KIAA1211Q6ZU35 1233 aa17.55■□□□□ 0.4
PDE1B-206ENST00000550285 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
PDE1B-206ENST00000550285 RAD50Q92878 1312 aa17.55■□□□□ 0.4
PDE1B-206ENST00000550285 MED23Q9ULK4 1368 aa17.55■□□□□ 0.4
PDE1B-206ENST00000550285 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
PDE1B-206ENST00000550285 TXNRD3Q86VQ6 643 aa17.54■□□□□ 0.4
PDE1B-206ENST00000550285 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
PDE1B-206ENST00000550285 SPATA5Q8NB90 893 aa17.53■□□□□ 0.4
PDE1B-206ENST00000550285 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
PDE1B-206ENST00000550285 FAM84BQ96KN1 310 aaPredicted RBP17.53■□□□□ 0.4
PDE1B-206ENST00000550285 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
PDE1B-206ENST00000550285 KCNJ4P48050 445 aa17.53■□□□□ 0.4
PDE1B-206ENST00000550285 ANKRD2Q9GZV1 360 aa17.53■□□□□ 0.4
PDE1B-206ENST00000550285 QSER1Q2KHR3 1735 aa17.53■□□□□ 0.4
PDE1B-206ENST00000550285 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.4
PDE1B-206ENST00000550285 ZNF804BA4D1E1 1349 aa17.52■□□□□ 0.4
PDE1B-206ENST00000550285 CCDC171Q6TFL3 1326 aa17.52■□□□□ 0.4
PDE1B-206ENST00000550285 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
PDE1B-206ENST00000550285 HSPA4P34932 840 aa17.52■□□□□ 0.4
PDE1B-206ENST00000550285 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.4
PDE1B-206ENST00000550285 SRGNP10124 158 aa17.52■□□□□ 0.39
PDE1B-206ENST00000550285 MCMDC2Q4G0Z9 681 aa17.52■□□□□ 0.39
PDE1B-206ENST00000550285 ZMYM1Q5SVZ6 1142 aa17.52■□□□□ 0.39
PDE1B-206ENST00000550285 RASEFQ8IZ41 740 aa17.52■□□□□ 0.39
PDE1B-206ENST00000550285 M0R2C6 588 aa17.51■□□□□ 0.39
PDE1B-206ENST00000550285 GPSM2P81274 684 aa17.51■□□□□ 0.39
PDE1B-206ENST00000550285 OSBP2Q969R2 916 aa17.51■□□□□ 0.39
PDE1B-206ENST00000550285 COL11A2P13942 1736 aaPredicted RBP17.51■□□□□ 0.39
PDE1B-206ENST00000550285 OLFM4Q6UX06 510 aa17.51■□□□□ 0.39
PDE1B-206ENST00000550285 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
PDE1B-206ENST00000550285 COL1A1P02452 1464 aaPredicted RBP17.51■□□□□ 0.39
PDE1B-206ENST00000550285 MAST3O60307 1309 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 IRS2Q9Y4H2 1338 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 IDH1O75874 414 aaKnown RBP17.5■□□□□ 0.39
PDE1B-206ENST00000550285 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
PDE1B-206ENST00000550285 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 NSFL1CQ9UNZ2 370 aaKnown RBP17.5■□□□□ 0.39
PDE1B-206ENST00000550285 RBM8AQ9Y5S9 174 aaKnown RBP17.5■□□□□ 0.39
PDE1B-206ENST00000550285 MYH7P12883 1935 aa17.5■□□□□ 0.39
PDE1B-206ENST00000550285 MCCP23508 829 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 BECN1Q14457 450 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 CAVIN4Q5BKX8 364 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 PRPF40BQ6NWY9 871 aaKnown RBP17.49■□□□□ 0.39
PDE1B-206ENST00000550285 FBXO33Q7Z6M2 555 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 RABEP1Q15276 862 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 PUS7LQ9H0K6 701 aaKnown RBP17.49■□□□□ 0.39
PDE1B-206ENST00000550285 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
PDE1B-206ENST00000550285 EPB41L2O43491 1005 aaKnown RBP17.48■□□□□ 0.39
PDE1B-206ENST00000550285 BBOX1O75936 387 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 PDE6BP35913 854 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 SLC9C2Q5TAH2 1124 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 TAF6LQ9Y6J9 622 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 XDHP47989 1333 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 ADD2P35612 726 aa17.48■□□□□ 0.39
PDE1B-206ENST00000550285 TTF1Q15361 905 aaPredicted RBP17.48■□□□□ 0.39
PDE1B-206ENST00000550285 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
PDE1B-206ENST00000550285 NPR1P16066 1061 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 CHRNA5P30532 468 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 HIBADHP31937 336 aaKnown RBP17.47■□□□□ 0.39
PDE1B-206ENST00000550285 SNX21Q969T3 373 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 JAG2Q9Y219 1238 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 CCDC125Q86Z20 511 aa17.47■□□□□ 0.39
PDE1B-206ENST00000550285 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDE1B-206ENST00000550285 UPF3BQ9BZI7 483 aaKnown RBP17.47■□□□□ 0.39
PDE1B-206ENST00000550285 CACNA1SQ13698 1873 aa17.46■□□□□ 0.39
PDE1B-206ENST00000550285 ZNF532Q9HCE3 1301 aa17.46■□□□□ 0.39
PDE1B-206ENST00000550285 PDE6AP16499 860 aa17.46■□□□□ 0.39
PDE1B-206ENST00000550285 ANAPC15P60006 121 aa17.46■□□□□ 0.39
PDE1B-206ENST00000550285 COL9A3Q14050 684 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms