RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 PDIA6Q15084 440 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 Q6ZUG5 572 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 CCAR1Q8IX12 1150 aaKnown RBP12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 ANKRD7Q92527 254 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 CLSTN2Q9H4D0 955 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 ST7Q9NRC1 585 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 PCDH11XQ9BZA7 1347 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 PCDH11YQ9BZA8 1340 aa12.61□□□□□ -0.39
SMARCC2-208ENST00000550150 CCDC69A6NI79 296 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 KINO60870 393 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 RPS6KB1P23443 525 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 RIC3Q7Z5B4 369 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 NCOA5Q9HCD5 579 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 NWD2Q9ULI1 1742 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 DDX46Q7L014 1031 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 SUCLG2Q96I99 432 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 C8orf37Q96NL8 207 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 OGFRQ9NZT2 677 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 DOT1LQ8TEK3 1739 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 TOB2Q14106 344 aaPredicted RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 SF3A1Q15459 793 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 MAP4K1Q92918 833 aa12.6□□□□□ -0.39
SMARCC2-208ENST00000550150 ANKRD1Q15327 319 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 PTPN21Q16825 1174 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 CTIFO43310 598 aaKnown RBP12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 SASH1O94885 1247 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 KIF20AO95235 890 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 NEK1Q96PY6 1258 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 TMX1Q9H3N1 280 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 CTNNA3Q9UI47 895 aa12.59□□□□□ -0.39
SMARCC2-208ENST00000550150 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.39
SMARCC2-208ENST00000550150 LRP10Q7Z4F1 713 aa12.58□□□□□ -0.39
SMARCC2-208ENST00000550150 NEUROD6Q96NK8 337 aa12.58□□□□□ -0.39
SMARCC2-208ENST00000550150 PAXBP1Q9Y5B6 917 aa12.58□□□□□ -0.39
SMARCC2-208ENST00000550150 TJP1Q07157 1748 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 ADCY9O60503 1353 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 OTUD7BQ6GQQ9 843 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 ERC1Q8IUD2 1116 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 TM6SF1Q9BZW5 370 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 UTRNP46939 3433 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 PLA2G4DQ86XP0 818 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 FSIP1Q8NA03 581 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 GTF3C6Q969F1 213 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 FEZ1Q99689 392 aa12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
SMARCC2-208ENST00000550150 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 A0A1B0GVL5 298 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 CABP4P57796 275 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 HSP90AA4PQ58FG1 418 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
SMARCC2-208ENST00000550150 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 STK11IPQ8N1F8 1099 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 PIGBQ92521 554 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 GRM8O00222 908 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 SYT10Q6XYQ8 523 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 TMC6Q7Z403 805 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 SLC4A9Q96Q91 983 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 JCADQ9P266 1359 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 VGLL3A8MV65 326 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 HIP1O00291 1037 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 PTCD1O75127 700 aaKnown RBP12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 STX1AQ16623 288 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 ERCC6LQ2NKX8 1250 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 FBXO38Q6PIJ6 1188 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 KIF18AQ8NI77 898 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 USP28Q96RU2 1077 aa12.56□□□□□ -0.4
SMARCC2-208ENST00000550150 ELP1O95163 1332 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 GOLPH3LQ9H4A5 285 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 TNS2Q63HR2 1409 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 SCRN1Q12765 414 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 FAM182BQ5T319 152 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 KRT222Q8N1A0 295 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 MARCH10Q8NA82 808 aaPredicted RBP12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 MYD88Q99836 296 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
SMARCC2-208ENST00000550150 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 CEP57L1Q8IYX8 460 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 POLR3GO15318 223 aaPredicted RBP12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 HOXB7P09629 217 aa12.54□□□□□ -0.4
SMARCC2-208ENST00000550150 SNW1Q13573 536 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms