RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 CEP41Q9BYV8 373 aa8.51□□□□□ -1.05
CNOT2-216ENST00000548939 DUOXA2Q1HG44 320 aa8.5□□□□□ -1.05
CNOT2-216ENST00000548939 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
CNOT2-216ENST00000548939 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
CNOT2-216ENST00000548939 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
CNOT2-216ENST00000548939 STOML1Q9UBI4 398 aa8.5□□□□□ -1.05
CNOT2-216ENST00000548939 ARID3CA6NKF2 412 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 TM4SF5O14894 197 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 DHX15O43143 795 aaKnown RBP8.49□□□□□ -1.05
CNOT2-216ENST00000548939 CES1P23141 567 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 XKR5Q6UX68 686 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 C1orf127Q8N9H9 656 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 SEC31BQ9NQW1 1179 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 SALL4Q9UJQ4 1053 aa8.49□□□□□ -1.05
CNOT2-216ENST00000548939 GSC2O15499 205 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
CNOT2-216ENST00000548939 CABP4P57796 275 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 GGNBP2Q9H3C7 697 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 PCMTD2Q9NV79 361 aa8.48□□□□□ -1.05
CNOT2-216ENST00000548939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.48□□□□□ -1.05
CNOT2-216ENST00000548939 H3BRJ5 948 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 IGLV1-40P01703 118 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 PDGFAP04085 211 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 ACPPP15309 386 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 SSTR4P31391 388 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 ARMC10Q8N2F6 343 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 FOXD4L4Q8WXT5 416 aaPredicted RBP8.47□□□□□ -1.05
CNOT2-216ENST00000548939 UTP4Q969X6 686 aaKnown RBP8.47□□□□□ -1.05
CNOT2-216ENST00000548939 KLHDC7BQ96G42 594 aa8.47□□□□□ -1.05
CNOT2-216ENST00000548939 A6NHS1 94 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 ADAM11O75078 769 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 MPSTP25325 297 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 MZF1P28698 734 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-216ENST00000548939 EIF1AXP47813 144 aaKnown RBP8.46□□□□□ -1.06
CNOT2-216ENST00000548939 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 UVSSAQ2YD98 709 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 UBASH3BQ8TF42 649 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 GTF3C2Q8WUA4 911 aaPredicted RBP8.46□□□□□ -1.06
CNOT2-216ENST00000548939 WNT8BQ93098 351 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 DZANK1Q9NVP4 752 aa8.46□□□□□ -1.06
CNOT2-216ENST00000548939 NFKBIEO00221 500 aa8.45□□□□□ -1.06
CNOT2-216ENST00000548939 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
CNOT2-216ENST00000548939 PMEPA1Q969W9 287 aa8.45□□□□□ -1.06
CNOT2-216ENST00000548939 FAM46AQ96IP4 442 aaKnown RBP8.45□□□□□ -1.06
CNOT2-216ENST00000548939 KRTAP9-2Q9BYQ4 174 aa8.45□□□□□ -1.06
CNOT2-216ENST00000548939 OSGEPQ9NPF4 335 aa8.45□□□□□ -1.06
CNOT2-216ENST00000548939 ALKBH2Q6NS38 261 aa8.44□□□□□ -1.06
CNOT2-216ENST00000548939 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.43□□□□□ -1.06
CNOT2-216ENST00000548939 SART1O43290 800 aaKnown RBP8.43□□□□□ -1.06
CNOT2-216ENST00000548939 TRPA1O75762 1119 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 SSFA2P28290 1259 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 CD97P48960 835 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 AAMPQ13685 434 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 SLC7A3Q8WY07 619 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 MYRFLQ96LU7 910 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 CHRDQ9H2X0 955 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 C7orf69Q9H7B7 122 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 POLIQ9UNA4 740 aa8.43□□□□□ -1.06
CNOT2-216ENST00000548939 TGFB1P01137 390 aa8.42□□□□□ -1.06
CNOT2-216ENST00000548939 ARL4DP49703 201 aa8.42□□□□□ -1.06
CNOT2-216ENST00000548939 NLRP12P59046 1061 aa8.42□□□□□ -1.06
CNOT2-216ENST00000548939 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
CNOT2-216ENST00000548939 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
CNOT2-216ENST00000548939 TMEM102Q8N9M5 508 aaPredicted RBP8.42□□□□□ -1.06
CNOT2-216ENST00000548939 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 COBLO75128 1261 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 NFIAQ12857 509 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 ANKRD34AQ69YU3 496 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 OSMRQ99650 979 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 RNF208Q9H0X6 261 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 SOX13Q9UN79 622 aa8.41□□□□□ -1.06
CNOT2-216ENST00000548939 KRTAP9-6A0A140TA67 174 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 HMX2A2RU54 273 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 EREGO14944 169 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 PHACTR2O75167 634 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 PPP1R15AO75807 674 aaPredicted RBP8.4□□□□□ -1.06
CNOT2-216ENST00000548939 C19orf57Q0VDD7 668 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 RNF43Q68DV7 783 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 ZDHHC13Q8IUH4 622 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 RUSC1Q9BVN2 902 aa8.4□□□□□ -1.06
CNOT2-216ENST00000548939 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 FAM13AO94988 1023 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 EDN3P14138 238 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 FDX2Q6P4F2 183 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
CNOT2-216ENST00000548939 CLEC10AQ8IUN9 316 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 FAM20CQ8IXL6 584 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 SNX29Q8TEQ0 813 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 NXPE3Q969Y0 559 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 ZKSCAN3Q9BRR0 538 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 KCNF1Q9H3M0 494 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 MTMR7Q9Y216 660 aa8.39□□□□□ -1.07
CNOT2-216ENST00000548939 MED26O95402 600 aa8.38□□□□□ -1.07
CNOT2-216ENST00000548939 BMP3P12645 472 aa8.38□□□□□ -1.07
CNOT2-216ENST00000548939 NPR3P17342 541 aa8.38□□□□□ -1.07
CNOT2-216ENST00000548939 USP5P45974 858 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms