RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 SALL4Q9UJQ4 1053 aa9.55□□□□□ -0.88
CNOT2-215ENST00000548863 TXNDC11Q6PKC3 985 aa9.54□□□□□ -0.88
CNOT2-215ENST00000548863 ACAD11Q709F0 780 aa9.54□□□□□ -0.88
CNOT2-215ENST00000548863 KRTAP4-12Q9BQ66 201 aa9.54□□□□□ -0.88
CNOT2-215ENST00000548863 SEPT3Q9UH03 358 aa9.54□□□□□ -0.88
CNOT2-215ENST00000548863 ZNF438Q7Z4V0 828 aa9.53□□□□□ -0.88
CNOT2-215ENST00000548863 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
CNOT2-215ENST00000548863 SEC31BQ9NQW1 1179 aa9.53□□□□□ -0.88
CNOT2-215ENST00000548863 SH2B1Q9NRF2 756 aaPredicted RBP9.53□□□□□ -0.88
CNOT2-215ENST00000548863 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
CNOT2-215ENST00000548863 SERPINA10Q9UK55 444 aa9.53□□□□□ -0.88
CNOT2-215ENST00000548863 KIAA1324LA8MWY0 1029 aaPredicted RBP9.52□□□□□ -0.89
CNOT2-215ENST00000548863 PIP4K2BP78356 416 aa9.52□□□□□ -0.89
CNOT2-215ENST00000548863 DUOXA2Q1HG44 320 aa9.52□□□□□ -0.89
CNOT2-215ENST00000548863 HELQQ8TDG4 1101 aa9.52□□□□□ -0.89
CNOT2-215ENST00000548863 OSGEPQ9NPF4 335 aa9.52□□□□□ -0.89
CNOT2-215ENST00000548863 FAM177BA6PVY3 158 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 H3BRJ5 948 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 NFKBIEO00221 500 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 ADAM11O75078 769 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 FOXD4L4Q8WXT5 416 aaPredicted RBP9.51□□□□□ -0.89
CNOT2-215ENST00000548863 PMEPA1Q969W9 287 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 MYRFLQ96LU7 910 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 CARD10Q9BWT7 1032 aa9.51□□□□□ -0.89
CNOT2-215ENST00000548863 COBLO75128 1261 aa9.5□□□□□ -0.89
CNOT2-215ENST00000548863 SSTR4P31391 388 aa9.5□□□□□ -0.89
CNOT2-215ENST00000548863 NFIAQ12857 509 aa9.5□□□□□ -0.89
CNOT2-215ENST00000548863 ATCAYQ86WG3 371 aa9.5□□□□□ -0.89
CNOT2-215ENST00000548863 UTP4Q969X6 686 aaKnown RBP9.5□□□□□ -0.89
CNOT2-215ENST00000548863 CCDC97Q96F63 343 aaPredicted RBP9.5□□□□□ -0.89
CNOT2-215ENST00000548863 DZANK1Q9NVP4 752 aa9.5□□□□□ -0.89
CNOT2-215ENST00000548863 COL17A1Q9UMD9 1497 aaPredicted RBP9.49□□□□□ -0.89
CNOT2-215ENST00000548863 PCSK2P16519 638 aa9.49□□□□□ -0.89
CNOT2-215ENST00000548863 CDC25BP30305 580 aa9.49□□□□□ -0.89
CNOT2-215ENST00000548863 CABP4P57796 275 aa9.49□□□□□ -0.89
CNOT2-215ENST00000548863 ZDHHC13Q8IUH4 622 aa9.49□□□□□ -0.89
CNOT2-215ENST00000548863 CES1P23141 567 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 MZF1P28698 734 aaPredicted RBP9.48□□□□□ -0.89
CNOT2-215ENST00000548863 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
CNOT2-215ENST00000548863 RNF43Q68DV7 783 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 ANKRD34AQ69YU3 496 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 MCTP1Q6DN14 999 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 CLEC10AQ8IUN9 316 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 C1orf127Q8N9H9 656 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 EDEM1Q92611 657 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 GGNBP2Q9H3C7 697 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 C7orf69Q9H7B7 122 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 KANSL3Q9P2N6 904 aa9.48□□□□□ -0.89
CNOT2-215ENST00000548863 PDE2AO00408 941 aaPredicted RBP9.47□□□□□ -0.89
CNOT2-215ENST00000548863 DDX3YO15523 660 aaKnown RBP9.47□□□□□ -0.89
CNOT2-215ENST00000548863 MED26O95402 600 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 PDGFAP04085 211 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 INTS5Q6P9B9 1019 aaKnown RBP9.47□□□□□ -0.89
CNOT2-215ENST00000548863 TRIM42Q8IWZ5 723 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 FAM20CQ8IXL6 584 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 FAM83CQ9BQN1 747 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 DBNDD2Q9BQY9 259 aa9.47□□□□□ -0.89
CNOT2-215ENST00000548863 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.47□□□□□ -0.89
CNOT2-215ENST00000548863 MEGF11A6BM72 1044 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 TGFB1P01137 390 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 DNM1Q05193 864 aaKnown RBP9.46□□□□□ -0.9
CNOT2-215ENST00000548863 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.46□□□□□ -0.9
CNOT2-215ENST00000548863 KRTAP1-3Q8IUG1 177 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 TMEM102Q8N9M5 508 aaPredicted RBP9.46□□□□□ -0.9
CNOT2-215ENST00000548863 UBASH3BQ8TF42 649 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 RNF208Q9H0X6 261 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 SOX13Q9UN79 622 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 HIF3AQ9Y2N7 669 aa9.46□□□□□ -0.9
CNOT2-215ENST00000548863 NPR3P17342 541 aa9.45□□□□□ -0.9
CNOT2-215ENST00000548863 ALKBH2Q6NS38 261 aa9.45□□□□□ -0.9
CNOT2-215ENST00000548863 HMX2A2RU54 273 aa9.44□□□□□ -0.9
CNOT2-215ENST00000548863 EIF1AXP47813 144 aaKnown RBP9.44□□□□□ -0.9
CNOT2-215ENST00000548863 TTC16Q8NEE8 873 aa9.44□□□□□ -0.9
CNOT2-215ENST00000548863 PRR19A6NJB7 356 aa9.43□□□□□ -0.9
CNOT2-215ENST00000548863 ACPPP15309 386 aa9.43□□□□□ -0.9
CNOT2-215ENST00000548863 SSFA2P28290 1259 aa9.43□□□□□ -0.9
CNOT2-215ENST00000548863 GRIK1P39086 918 aa9.43□□□□□ -0.9
CNOT2-215ENST00000548863 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
CNOT2-215ENST00000548863 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
CNOT2-215ENST00000548863 BMP3P12645 472 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 SPINK2P20155 84 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 PREPP48147 710 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 ARL4DP49703 201 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 LCE3BQ5TA77 95 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 GTF3C2Q8WUA4 911 aaPredicted RBP9.42□□□□□ -0.9
CNOT2-215ENST00000548863 BSNDQ8WZ55 320 aa9.42□□□□□ -0.9
CNOT2-215ENST00000548863 MPSTP25325 297 aa9.41□□□□□ -0.9
CNOT2-215ENST00000548863 DTX1Q86Y01 620 aa9.41□□□□□ -0.9
CNOT2-215ENST00000548863 RUSC1Q9BVN2 902 aa9.41□□□□□ -0.9
CNOT2-215ENST00000548863 TMEM88BA6NKF7 163 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 USP5P45974 858 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 NLRP12P59046 1061 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 EHHADHQ08426 723 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 BEND4Q6ZU67 534 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 HHIPQ96QV1 700 aa9.4□□□□□ -0.9
CNOT2-215ENST00000548863 OSMRQ99650 979 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms