RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 PSME4Q14997 1843 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 TACC2O95359 2948 aa0.68□□□□□ -2.3
CEP290-203ENST00000547691 POLR3AO14802 1390 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 NSD2O96028 1365 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 METP08581 1390 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SOX1O00570 391 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 PPP1R15AO75807 674 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 PDE4AP27815 886 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 GDF5P43026 501 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 TRIM32Q13049 653 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NEUROD1Q13562 356 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 MLECQ14165 292 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NUDT18Q6ZVK8 323 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 KRT27Q7Z3Y8 459 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CD163Q86VB7 1156 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 BHLHE22Q8NFJ8 381 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 SPON1Q9HCB6 807 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 HMCN2Q8NDA2 5059 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 HSPG2P98160 4391 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ROBO2Q9HCK4 1378 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 COL4A1P02462 1669 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NFIBO00712 420 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 TM4SF5O14894 197 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SKIP12755 728 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ITGA6P23229 1130 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NRG1Q02297 640 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 TRAPPC3LQ5T215 181 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 POU5F2Q8N7G0 328 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 RDH13Q8NBN7 331 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SLC39A13Q96H72 371 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 GAS2L1Q99501 681 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 OXCT2Q9BYC2 517 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 PGPEP1Q9NXJ5 209 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CDK11AQ9UQ88 783 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 ANKRD31Q8N7Z5 1873 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ANK3Q12955 4377 aaKnown RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 CCNB3Q8WWL7 1395 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CRB1P82279 1406 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 STK25O00506 426 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 IKBKBO14920 756 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 H2AFB1P0C5Y9 115 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 H2AFB2P0C5Z0 115 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CSB-PGBD3P0DP91 1061 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NNTQ13423 1086 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CIAPIN1Q6FI81 312 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SEPT12Q8IYM1 358 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 PGBD3Q8N328 593 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ZNF843Q8N446 348 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ZFP91Q96JP5 570 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 ABCC11Q96J66 1382 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SIPA1L3O60292 1781 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 ZIC2O95409 532 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 PTSQ03393 145 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SKIDA1Q1XH10 827 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ZXDCQ2QGD7 858 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 TSGA10IPQ3SY00 556 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 MEX3CQ5U5Q3 659 aaKnown RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 TXNDC2Q86VQ3 553 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 GPR161Q8N6U8 529 aaKnown RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 FAM84AQ96KN4 292 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SYT17Q9BSW7 474 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 MTFR1LQ9H019 292 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 JAG2Q9Y219 1238 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 EID1Q9Y6B2 187 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 SALL3Q9BXA9 1300 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 OBSCNQ5VST9 7968 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CELSR2Q9HCU4 2923 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 OIP5O43482 229 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ACTN4O43707 911 aaKnown RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 FSHBP01225 129 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 BMP4P12644 408 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 EZH2Q15910 746 aaKnown RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 DEFB132Q7Z7B7 95 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 PROSER2Q86WR7 435 aaPredicted RBP0.67□□□□□ -2.3
CEP290-203ENST00000547691 ACSS3Q9H6R3 686 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 TPSG1Q9NRR2 321 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 ARAP2Q8WZ64 1704 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 NPHP3Q7Z494 1330 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 PASKQ96RG2 1323 aa0.67□□□□□ -2.3
CEP290-203ENST00000547691 CNTNAP1P78357 1384 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 SNED1Q8TER0 1413 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 TDRD15B5MCY1 1934 aaKnown RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 CFAP65Q6ZU64 1925 aaKnown RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 MAST2Q6P0Q8 1798 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 PRSS12P56730 875 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 PUM1Q14671 1186 aaKnown RBP eCLIP0.66□□□□□ -2.3
CEP290-203ENST00000547691 ZNF648Q5T619 568 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 FAM196AQ6ZSG2 479 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 PRR12Q9ULL5 1215 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 LAMA1P25391 3075 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 ANKRD30BQ9BXX2 1392 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 NUTM2BA6NNL0 878 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 NUTM2EB1AL46 878 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 R3HDM1Q15032 1099 aaKnown RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 NUTM2DQ5VT03 806 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 CDCP2Q5VXM1 449 aa0.66□□□□□ -2.3
CEP290-203ENST00000547691 NUTM2AQ8IVF1 878 aaPredicted RBP0.66□□□□□ -2.3
CEP290-203ENST00000547691 FAM9AQ8IZU1 332 aaPredicted RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms