RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 TET3O43151 1660 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 TFRCP02786 760 aaKnown RBP13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 CHMP4BP1P59074 171 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 ST3GAL1Q11201 340 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 TRIM65Q6PJ69 517 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 SAMM50Q9Y512 469 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 CAPN7Q9Y6W3 813 aa13.75□□□□□ -0.21
RBFOX1-208ENST00000547372 EBAG9O00559 213 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 CCP110O43303 1012 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 SARNPP82979 210 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 COL9A3Q14050 684 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 N4BP2L2Q92802 583 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 CALR3Q96L12 384 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 ZSCAN12O43309 604 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 PPFIA4O75335 1185 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 ATP1A3P13637 1013 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 DPCR1Q3MIW9 517 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 SWT1Q5T5J6 900 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 WAPLQ7Z5K2 1190 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 IQUBQ8NA54 791 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 ESF1Q9H501 851 aaKnown RBP13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 KCND1Q9NSA2 647 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 IRF6O14896 467 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 PAX7P23759 505 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 PSMA5P28066 241 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 CLIC6Q96NY7 704 aa13.74□□□□□ -0.21
RBFOX1-208ENST00000547372 AATKQ6ZMQ8 1374 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 INPP5BP32019 993 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 NF2P35240 595 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 AKAP17AQ02040 695 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 BRF1Q92994 677 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 CD248Q9HCU0 757 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 KIF1BO60333 1816 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 CCDC151A5D8V7 595 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 EIF5P55010 431 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 UBASH3AP57075 661 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 EXOC5O00471 708 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 PPP2R2CQ9Y2T4 447 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 ZC3H13Q5T200 1668 aaKnown RBP13.73□□□□□ -0.21
RBFOX1-208ENST00000547372 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 OSBPL5Q9H0X9 879 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 IMPACTQ9P2X3 320 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 ZFYVE9O95405 1425 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 TTC41PQ6P2S7 1318 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 TUBB4AP04350 444 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 MAP2K1Q02750 393 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 CASP8Q14790 479 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 GOLPH3LQ9H4A5 285 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 FANCAO15360 1455 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 RNF40O75150 1001 aa13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 SKAP2O75563 359 aaPredicted RBP13.72□□□□□ -0.21
RBFOX1-208ENST00000547372 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 MYO1FO00160 1098 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 IL13P35225 146 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 ADKP55263 362 aaKnown RBP13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 PNKPQ96T60 521 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 LRRC2Q9BYS8 371 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 EHD4Q9H223 541 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 DNAJC5Q9H3Z4 198 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 FANCCQ00597 558 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 ACTN3Q08043 901 aaPredicted RBP13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 SCRN1Q12765 414 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 PPP1R42Q7Z4L9 355 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 ZSWIM6Q9HCJ5 1215 aa13.71□□□□□ -0.21
RBFOX1-208ENST00000547372 CTAGE5O15320 804 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 BRD3Q15059 726 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 CPLX3Q8WVH0 158 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 NEURL4Q96JN8 1562 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 AOX1Q06278 1338 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 BEND6Q5SZJ8 279 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 HDGFL1Q5TGJ6 251 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 BCAS4Q8TDM0 211 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 MPHOSPH8Q99549 860 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 PEX19P40855 299 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 RNF187Q5TA31 235 aaPredicted RBP13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
RBFOX1-208ENST00000547372 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
RBFOX1-208ENST00000547372 PPP1R12AO14974 1030 aaPredicted RBP13.69□□□□□ -0.22
RBFOX1-208ENST00000547372 CALRP27797 417 aaKnown RBP13.69□□□□□ -0.22
RBFOX1-208ENST00000547372 FLIIQ13045 1269 aa13.69□□□□□ -0.22
RBFOX1-208ENST00000547372 G3BP1Q13283 466 aaKnown RBP eCLIP13.69□□□□□ -0.22
RBFOX1-208ENST00000547372 STK38Q15208 465 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms