RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 CPLX2Q6PUV4 134 aaKnown RBP11.83□□□□□ -0.52
SOD2-216ENST00000546260 UNC5CLQ8IV45 518 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 SGSM3Q96HU1 749 aa11.83□□□□□ -0.52
SOD2-216ENST00000546260 PPP1R12BO60237 982 aaPredicted RBP11.83□□□□□ -0.52
SOD2-216ENST00000546260 SWT1Q5T5J6 900 aaKnown RBP11.83□□□□□ -0.52
SOD2-216ENST00000546260 FBLN1P23142 703 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 SNCBQ16143 134 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 WDR24Q96S15 920 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 ZMYND10O75800 440 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 SF3A3Q12874 501 aaKnown RBP eCLIP11.82□□□□□ -0.52
SOD2-216ENST00000546260 RBM8AQ9Y5S9 174 aaKnown RBP11.82□□□□□ -0.52
SOD2-216ENST00000546260 JAK2O60674 1132 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 HSF2BPO75031 334 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 SPDL1Q96EA4 605 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 SPECC1Q5M775 1068 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 NFATC2IPQ8NCF5 419 aa11.82□□□□□ -0.52
SOD2-216ENST00000546260 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 LONRF3Q496Y0 759 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 RPUSD2Q8IZ73 545 aaKnown RBP11.81□□□□□ -0.52
SOD2-216ENST00000546260 IGSF22Q8N9C0 903 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 BICRAQ9NZM4 1560 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 KIF3CO14782 793 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 OPA1O60313 960 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 IFT88Q13099 833 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 CNKSR2Q8WXI2 1034 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 TUBBP07437 444 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 GCFC2P16383 781 aaKnown RBP11.81□□□□□ -0.52
SOD2-216ENST00000546260 RIN2Q8WYP3 895 aaPredicted RBP11.81□□□□□ -0.52
SOD2-216ENST00000546260 GUCA1BQ9UMX6 200 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 A2MP01023 1474 aa11.81□□□□□ -0.52
SOD2-216ENST00000546260 SGSM2O43147 1006 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 PNMA8AQ86V59 439 aaPredicted RBP11.8□□□□□ -0.52
SOD2-216ENST00000546260 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 FTOQ9C0B1 505 aaKnown RBP eCLIP11.8□□□□□ -0.526e-6■■□□□ 13.3
SOD2-216ENST00000546260 PARP3Q9Y6F1 533 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 CLASP1Q7Z460 1538 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 MSH6P52701 1360 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 EIF2S2P20042 333 aaKnown RBP11.8□□□□□ -0.52
SOD2-216ENST00000546260 PSME1Q06323 249 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 IQCB1Q15051 598 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 SND1Q7KZF4 910 aaKnown RBP eCLIP11.8□□□□□ -0.52
SOD2-216ENST00000546260 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
SOD2-216ENST00000546260 ABCC4O15439 1325 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 EXOC5O00471 708 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 MAATS1Q7Z4T9 603 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 IQUBQ8NA54 791 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 NAPGQ99747 312 aaPredicted RBP11.8□□□□□ -0.52
SOD2-216ENST00000546260 JADE2Q9NQC1 790 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 KANK1Q14678 1352 aa11.8□□□□□ -0.52
SOD2-216ENST00000546260 KIF3BO15066 747 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 MYL5Q02045 173 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 ADCK5Q3MIX3 580 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 ZNF513Q8N8E2 541 aaPredicted RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 MIEF2Q96C03 454 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 SAAL1Q96ER3 474 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 TACO1Q9BSH4 297 aaKnown RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 IQCEQ6IPM2 695 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 OSBPL5Q9H0X9 879 aaPredicted RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 CAND2O75155 1236 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 GLRX3O76003 335 aaKnown RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 ATP1A3P13637 1013 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 SMARCC2Q8TAQ2 1214 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 ZBTB10Q96DT7 871 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 MARCKSP29966 332 aaPredicted RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 HPDP32754 393 aaPredicted RBP11.79□□□□□ -0.52
SOD2-216ENST00000546260 DNA2P51530 1060 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 VSNL1P62760 191 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 TUBB4BP68371 445 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 MCM10Q7L590 875 aa11.79□□□□□ -0.52
SOD2-216ENST00000546260 TEFQ10587 303 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 CCDC40Q4G0X9 1142 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 KCTD16Q68DU8 428 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 PHF23Q9BUL5 403 aaPredicted RBP11.78□□□□□ -0.52
SOD2-216ENST00000546260 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
SOD2-216ENST00000546260 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 ATG3Q9NT62 314 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 NUP88Q99567 741 aaPredicted RBP11.78□□□□□ -0.52
SOD2-216ENST00000546260 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 FANCLQ9NW38 375 aa11.78□□□□□ -0.52
SOD2-216ENST00000546260 G3BP2Q9UN86 482 aaKnown RBP11.78□□□□□ -0.52
SOD2-216ENST00000546260 PPFIA1Q13136 1202 aa11.77□□□□□ -0.52
SOD2-216ENST00000546260 CREB3L3Q68CJ9 461 aa11.77□□□□□ -0.52
SOD2-216ENST00000546260 CCDC50Q8IVM0 306 aa11.77□□□□□ -0.52
SOD2-216ENST00000546260 KLC4Q9NSK0 619 aa11.77□□□□□ -0.52
SOD2-216ENST00000546260 E7EVH7 732 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 PDCLQ13371 301 aa11.77□□□□□ -0.53
SOD2-216ENST00000546260 SF3B2Q13435 895 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms