RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 GPR108Q9NPR9 543 aa18.4■□□□□ 0.54
SCAP-215ENST00000545718 RFX7Q2KHR2 1363 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 PALLDQ8WX93 1383 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 ZAP70P43403 619 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 METTL24Q5JXM2 366 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 FAM13BQ9NYF5 915 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 PFKFB2O60825 505 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 SASS6Q6UVJ0 657 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 DRC7Q8IY82 874 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 FAM200AQ8TCP9 573 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 MRVI1Q9Y6F6 885 aa18.39■□□□□ 0.53
SCAP-215ENST00000545718 PIGBQ92521 554 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 COL5A2P05997 1499 aaPredicted RBP18.38■□□□□ 0.53
SCAP-215ENST00000545718 CTDNEP1O95476 244 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 LDHAL6AQ6ZMR3 332 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 ISCA1Q9BUE6 129 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 DDX19AQ9NUU7 478 aaKnown RBP18.38■□□□□ 0.53
SCAP-215ENST00000545718 CFAP45Q9UL16 551 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 AKAP2Q9Y2D5 859 aa18.38■□□□□ 0.53
SCAP-215ENST00000545718 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 FAM177BA6PVY3 158 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 CIAO1O76071 339 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 HLFQ16534 295 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 OTUD7BQ6GQQ9 843 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
SCAP-215ENST00000545718 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
SCAP-215ENST00000545718 STARD3NLO95772 234 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 NKX1-1Q15270 411 aaPredicted RBP18.36■□□□□ 0.53
SCAP-215ENST00000545718 DNAJC25Q9H1X3 360 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 KIF3AQ9Y496 699 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 PDIA3P30101 505 aaKnown RBP18.36■□□□□ 0.53
SCAP-215ENST00000545718 ARID3AQ99856 593 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 CBX8Q9HC52 389 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 EXOSC10Q01780 885 aaKnown RBP18.36■□□□□ 0.53
SCAP-215ENST00000545718 NOLC1Q14978 699 aaKnown RBP eCLIP18.36■□□□□ 0.532e-6■■□□□ 12
SCAP-215ENST00000545718 IMMTQ16891 758 aaKnown RBP18.36■□□□□ 0.53
SCAP-215ENST00000545718 PUS7LQ9H0K6 701 aaKnown RBP18.36■□□□□ 0.53
SCAP-215ENST00000545718 CLSTN2Q9H4D0 955 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
SCAP-215ENST00000545718 APPP05067 770 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 HMGN5P82970 282 aaKnown RBP18.35■□□□□ 0.53
SCAP-215ENST00000545718 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 FGAP02671 866 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 ME1P48163 572 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 LRRFIP1Q32MZ4 808 aaKnown RBP18.35■□□□□ 0.53
SCAP-215ENST00000545718 SMARCC2Q8TAQ2 1214 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 TRIM5Q9C035 493 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 GREM2Q9H772 168 aa18.35■□□□□ 0.53
SCAP-215ENST00000545718 A0A087WWV3 80 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 ITGA6P23229 1130 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 USP28Q96RU2 1077 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 LLPHQ9BRT6 129 aaKnown RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 ATG3Q9NT62 314 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 IDH1O75874 414 aaKnown RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 PCCAP05165 728 aaPredicted RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 ZNF165P49910 485 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 TRMT112Q9UI30 125 aaKnown RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 TBC1D2BQ9UPU7 963 aa18.34■□□□□ 0.53
SCAP-215ENST00000545718 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
SCAP-215ENST00000545718 KCPQ6ZWJ8 1503 aa18.33■□□□□ 0.53
SCAP-215ENST00000545718 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.53
SCAP-215ENST00000545718 HELBQ8NG08 1087 aaPredicted RBP18.33■□□□□ 0.53
SCAP-215ENST00000545718 PIBF1Q8WXW3 757 aa18.33■□□□□ 0.53
SCAP-215ENST00000545718 GLI3P10071 1580 aa18.33■□□□□ 0.53
SCAP-215ENST00000545718 ERCC4Q92889 916 aaPredicted RBP18.33■□□□□ 0.52
SCAP-215ENST00000545718 CTNNA3Q9UI47 895 aa18.33■□□□□ 0.52
SCAP-215ENST00000545718 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
SCAP-215ENST00000545718 GOLGA8BA8MQT2 603 aa18.33■□□□□ 0.52
SCAP-215ENST00000545718 PRC1O43663 620 aa18.33■□□□□ 0.52
SCAP-215ENST00000545718 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.52
SCAP-215ENST00000545718 CPLX1O14810 134 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 GPAA1O43292 621 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 RRP9O43818 475 aaKnown RBP18.32■□□□□ 0.52
SCAP-215ENST00000545718 CCDC73Q6ZRK6 1079 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 GOLGA6L6A8MZA4 724 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 ZNF213O14771 459 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
SCAP-215ENST00000545718 ABCC6O95255 1503 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 PTGS1P23219 599 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
SCAP-215ENST00000545718 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
SCAP-215ENST00000545718 APPBP2Q92624 585 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 PYCARDQ9ULZ3 195 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 ZBTB1Q9Y2K1 713 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 MAP3K15Q6ZN16 1313 aa18.31■□□□□ 0.52
SCAP-215ENST00000545718 ANKRD18BA2A2Z9 1011 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 MCAMP43121 646 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 SF3A1Q15459 793 aaKnown RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 ZNF396Q96N95 335 aaPredicted RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
SCAP-215ENST00000545718 KINO60870 393 aaKnown RBP18.3■□□□□ 0.52
SCAP-215ENST00000545718 RXRAP19793 462 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms