RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 ANKRD13DQ6ZTN6 518 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 PLBD2Q8NHP8 589 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 FAM89AQ96GI7 184 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 ISCA1Q9BUE6 129 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 PRO3102Q9H379 93 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 TSPYL4Q9UJ04 414 aa9.56□□□□□ -0.88
COPA-207ENST00000545284 ANGEL1Q9UNK9 670 aaKnown RBP9.56□□□□□ -0.88
COPA-207ENST00000545284 KIAA0100Q14667 2235 aaKnown RBP9.55□□□□□ -0.88
COPA-207ENST00000545284 BRCA2P51587 3418 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 IRS4O14654 1257 aaPredicted RBP9.55□□□□□ -0.88
COPA-207ENST00000545284 NFE2L2Q16236 605 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 PROSER3Q2NL68 480 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 CCDC152Q4G0S7 254 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 WNK4Q96J92 1243 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 HTATIP2Q9BUP3 242 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 NR2E3Q9Y5X4 410 aa9.55□□□□□ -0.88
COPA-207ENST00000545284 DDX60Q8IY21 1712 aaKnown RBP9.55□□□□□ -0.88
COPA-207ENST00000545284 WDHD1O75717 1129 aaPredicted RBP9.54□□□□□ -0.88
COPA-207ENST00000545284 IREB2P48200 963 aaKnown RBP9.54□□□□□ -0.88
COPA-207ENST00000545284 AIMP1Q12904 312 aaKnown RBP9.54□□□□□ -0.88
COPA-207ENST00000545284 ZBTB38Q8NAP3 1195 aaPredicted RBP9.54□□□□□ -0.88
COPA-207ENST00000545284 DPF3Q92784 378 aa9.54□□□□□ -0.88
COPA-207ENST00000545284 ZBED3Q96IU2 234 aaPredicted RBP9.54□□□□□ -0.88
COPA-207ENST00000545284 COA1Q9GZY4 146 aa9.54□□□□□ -0.88
COPA-207ENST00000545284 DEFB129Q9H1M3 183 aa9.54□□□□□ -0.88
COPA-207ENST00000545284 HOXB7P09629 217 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 ANKRD13AQ8IZ07 590 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 MTMR14Q8NCE2 650 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 PLEKHF1Q96S99 279 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 ZFYVE28Q9HCC9 887 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 SCAF8Q9UPN6 1271 aaKnown RBP9.53□□□□□ -0.88
COPA-207ENST00000545284 CENPFP49454 3210 aa9.53□□□□□ -0.88
COPA-207ENST00000545284 TRIOBPQ9H2D6 2365 aa9.52□□□□□ -0.88
COPA-207ENST00000545284 MED23Q9ULK4 1368 aa9.52□□□□□ -0.88
COPA-207ENST00000545284 A0A0C4DFX4 3053 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 ANXA1P04083 346 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 PRKG1Q13976 671 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 KIF22Q14807 665 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 HELBQ8NG08 1087 aaPredicted RBP9.52□□□□□ -0.89
COPA-207ENST00000545284 PTPN18Q99952 460 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 ZCCHC17Q9NP64 241 aaKnown RBP9.52□□□□□ -0.89
COPA-207ENST00000545284 PTCH2Q9Y6C5 1203 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 KDM3BQ7LBC6 1761 aa9.52□□□□□ -0.89
COPA-207ENST00000545284 MYO1BO43795 1136 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 PDE8AO60658 829 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 UBE2Q1Q7Z7E8 422 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 ANKRD18AQ8IVF6 992 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 MS4A4AQ96JQ5 239 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 BSDC1Q9NW68 430 aaPredicted RBP9.51□□□□□ -0.89
COPA-207ENST00000545284 HYPKQ9NX55 129 aa9.51□□□□□ -0.89
COPA-207ENST00000545284 DBF4Q9UBU7 674 aaPredicted RBP9.51□□□□□ -0.89
COPA-207ENST00000545284 LAMB2P55268 1798 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 RANBP2P49792 3224 aaKnown RBP9.5□□□□□ -0.89
COPA-207ENST00000545284 GJA8P48165 433 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 GTF2A2P52657 109 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 LMOD3Q0VAK6 560 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 DLGAP5Q15398 846 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 TTLL5Q6EMB2 1281 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 CLMNQ96JQ2 1002 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 CDC5LQ99459 802 aaKnown RBP9.5□□□□□ -0.89
COPA-207ENST00000545284 SEC31BQ9NQW1 1179 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 ZNF804BA4D1E1 1349 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 SCN9AQ15858 1988 aa9.5□□□□□ -0.89
COPA-207ENST00000545284 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 TLR2O60603 784 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 USP2O75604 605 aaPredicted RBP9.49□□□□□ -0.89
COPA-207ENST00000545284 SASH1O94885 1247 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 PCCAP05165 728 aaPredicted RBP9.49□□□□□ -0.89
COPA-207ENST00000545284 GJB1P08034 283 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 HOXD10P28358 340 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 CAP1Q01518 475 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 TAF1CQ15572 869 aaPredicted RBP9.49□□□□□ -0.89
COPA-207ENST00000545284 STXBP5LQ9Y2K9 1186 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
COPA-207ENST00000545284 CUL9Q8IWT3 2517 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
COPA-207ENST00000545284 ZBTB7BO15156 539 aaPredicted RBP9.48□□□□□ -0.89
COPA-207ENST00000545284 BMP8BP34820 402 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 GJA5P36382 358 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 CCT4P50991 539 aaKnown RBP9.48□□□□□ -0.89
COPA-207ENST00000545284 LACTBP83111 547 aaPredicted RBP9.48□□□□□ -0.89
COPA-207ENST00000545284 TNFAIP1Q13829 316 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 OPTNQ96CV9 577 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 CHPF2Q9P2E5 772 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 MINPP1Q9UNW1 487 aa9.48□□□□□ -0.89
COPA-207ENST00000545284 CHL1O00533 1208 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 FKBP1AP62942 108 aaKnown RBP9.47□□□□□ -0.89
COPA-207ENST00000545284 RTL5Q5HYW3 569 aaPredicted RBP9.47□□□□□ -0.89
COPA-207ENST00000545284 HDGFL1Q5TGJ6 251 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 KIAA0825Q8IV33 1275 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 SH3TC2Q8TF17 1288 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 SHISA4Q96DD7 197 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 CEP290O15078 2479 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 COL6A3P12111 3177 aa9.47□□□□□ -0.89
COPA-207ENST00000545284 CCL15-CCL14A0A0B4J2E2 113 aa9.46□□□□□ -0.9
COPA-207ENST00000545284 SPDYE2BA6NHP3 402 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms