RNA–Protein interactions for RNA: ENST00000545021.2

LYSMD4-210, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-210ENST00000545021 CHRNA2Q15822 529 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 BECN2A8MW95 431 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 MYCNP04198 464 aaPredicted RBP22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 LRRFIP1Q32MZ4 808 aaKnown RBP22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 NME9Q86XW9 330 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 PPM1EQ8WY54 764 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 PDRG1Q9NUG6 133 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 TTC41PQ6P2S7 1318 aa22.41■■□□□ 1.18
LYSMD4-210ENST00000545021 CCP110O43303 1012 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 GNAI3P08754 354 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 FAM173BQ6P4H8 233 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 FERMT3Q86UX7 667 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 BICD2Q8TD16 824 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 DNAI1Q9UI46 699 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 SWT1Q5T5J6 900 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 GPR161Q8N6U8 529 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 CCDC34Q96HJ3 373 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 ARFGAP3Q9NP61 516 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 CEP83Q9Y592 693 aa22.4■■□□□ 1.18
LYSMD4-210ENST00000545021 CTAGE5O15320 804 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 GNAI2P04899 355 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 CCDC172P0C7W6 258 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 GORABQ5T7V8 394 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 DHX40Q8IX18 779 aaKnown RBP22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 TM6SF1Q9BZW5 370 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 LRRC37A3O60309 1634 aa22.39■■□□□ 1.18
LYSMD4-210ENST00000545021 CT47A1Q5JQC4 288 aaPredicted RBP22.39■■□□□ 1.17
LYSMD4-210ENST00000545021 NBPF11Q86T75 865 aa22.39■■□□□ 1.17
LYSMD4-210ENST00000545021 PGBD1Q96JS3 809 aa22.39■■□□□ 1.17
LYSMD4-210ENST00000545021 FUT8Q9BYC5 575 aa22.39■■□□□ 1.17
LYSMD4-210ENST00000545021 EIF3CLB5ME19 914 aaKnown RBP22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 CCT4P50991 539 aaKnown RBP22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 EVCP57679 992 aa22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 CCDC91Q7Z6B0 441 aa22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 EIF3CQ99613 913 aaKnown RBP22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 NRDCO43847 1150 aa22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 CPA1P15085 419 aa22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 ME3Q16798 604 aa22.38■■□□□ 1.17
LYSMD4-210ENST00000545021 DISP2A7MBM2 1401 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 PEAK1Q9H792 1746 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 GIGYF1O75420 1035 aaPredicted RBP22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 CDCA7Q9BWT1 371 aaPredicted RBP22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 ZSWIM6Q9HCJ5 1215 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 CPP00450 1065 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 EVA1CP58658 441 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 HOMER1Q86YM7 354 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 GPATCH11Q8N954 259 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 CARD6Q9BX69 1037 aa22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 CCDC9Q9Y3X0 531 aaKnown RBP22.37■■□□□ 1.17
LYSMD4-210ENST00000545021 GSCP56915 257 aaPredicted RBP22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 CORO7P57737 925 aa22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 KRT27Q7Z3Y8 459 aa22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 SYTL4Q96C24 671 aaPredicted RBP22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 TFIP11Q9UBB9 837 aaKnown RBP22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 CYP46A1Q9Y6A2 500 aa22.36■■□□□ 1.17
LYSMD4-210ENST00000545021 TNS1Q9HBL0 1735 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 PRR29P0C7W0 189 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 SFPQP23246 707 aaKnown RBP eCLIP22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 ARMCX5Q6P1M9 558 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 MKRN1Q9UHC7 482 aaKnown RBP22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 BCL9O00512 1426 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 H3BQF6 201 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 DTNBO60941 627 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 TRIM65Q6PJ69 517 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 BANK1Q8NDB2 785 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 COG3Q96JB2 828 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 ANO10Q9NW15 660 aa22.35■■□□□ 1.17
LYSMD4-210ENST00000545021 SMC2O95347 1197 aa22.34■■□□□ 1.17
LYSMD4-210ENST00000545021 MCTP2Q6DN12 878 aa22.34■■□□□ 1.17
LYSMD4-210ENST00000545021 CARD10Q9BWT7 1032 aa22.34■■□□□ 1.17
LYSMD4-210ENST00000545021 PARP3Q9Y6F1 533 aa22.34■■□□□ 1.17
LYSMD4-210ENST00000545021 LARP1Q6PKG0 1096 aaKnown RBP22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 KCNB2Q92953 911 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 ZSCAN16Q9H4T2 348 aaPredicted RBP22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 MAP2K7O14733 419 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 URI1O94763 535 aaPredicted RBP22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 JAKMIP3Q5VZ66 844 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 NECAB1Q8N987 351 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 ZRANB1Q9UGI0 708 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 ADCY9O60503 1353 aa22.33■■□□□ 1.17
LYSMD4-210ENST00000545021 ATP8B2P98198 1209 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 SART3Q15020 963 aaKnown RBP22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 FAM98CQ17RN3 349 aaKnown RBP22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 CEP57L1Q8IYX8 460 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 CEP89Q96ST8 783 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 DONSONQ9NYP3 566 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 RGPD3A6NKT7 1758 aaPredicted RBP22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 RGPD4Q7Z3J3 1758 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 MMS22LQ6ZRQ5 1243 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 CXorf56Q9H5V9 222 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 STRN4Q9NRL3 753 aa22.32■■□□□ 1.16
LYSMD4-210ENST00000545021 IL13P35225 146 aa22.31■■□□□ 1.16
LYSMD4-210ENST00000545021 RSRC2Q7L4I2 434 aaKnown RBP22.31■■□□□ 1.16
LYSMD4-210ENST00000545021 MSL3Q8N5Y2 521 aaKnown RBP22.31■■□□□ 1.16
LYSMD4-210ENST00000545021 IP6K1Q92551 441 aa22.31■■□□□ 1.16
LYSMD4-210ENST00000545021 RABGGTAQ92696 567 aa22.31■■□□□ 1.16
LYSMD4-210ENST00000545021 PNMA6EA0A0J9YXQ4 647 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms