RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 SHTN1A0MZ66 631 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 ADM5C9JUS6 153 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 H7C1D1 291 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 PPEF1O14829 653 aaPredicted RBP6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 TBC1D8O95759 1140 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 TM4SF4P48230 202 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 FKBP1BP68106 108 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 KIAA2012Q0VF49 1180 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 ARMC5Q96C12 935 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 BCL2L13Q9BXK5 485 aa6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 TSR3Q9UJK0 312 aaKnown RBP6.56□□□□□ -1.36
NPIPB3-211ENST00000542953 SPTBN5Q9NRC6 3674 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 GFRA3O60609 400 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 FKTNO75072 461 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 RAD17O75943 681 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 EGFRP00533 1210 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 MFSD10Q14728 455 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 MTHFSDQ2M296 383 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 SUPT20HQ8NEM7 779 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 RPGRQ92834 1020 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 RBM17Q96I25 401 aaKnown RBP6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 NYXQ9GZU5 481 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 ATP6V0A2Q9Y487 856 aa6.55□□□□□ -1.36
NPIPB3-211ENST00000542953 PAPPA2Q9BXP8 1791 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 YDJCA8MPS7 323 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 H0YGN5 161 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 EN2P19622 333 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 OTOP1Q7RTM1 612 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 SAMD7Q7Z3H4 446 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 IL17REQ8NFR9 667 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 DCPSQ96C86 337 aaKnown RBP6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 CDCA5Q96FF9 252 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 PRO3102Q9H379 93 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 USP16Q9Y5T5 823 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 CEMIPQ8WUJ3 1361 aa6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 SIPA1L3O60292 1781 aaPredicted RBP6.54□□□□□ -1.36
NPIPB3-211ENST00000542953 PRAMEF22A3QJZ6 481 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 FAM177BA6PVY3 158 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 NBPF26B4DH59 902 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 LCE2BO14633 110 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 RPS12P25398 132 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 GTF2E1P29083 439 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 PIP4K2AP48426 406 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 TEFQ10587 303 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 HLFQ16534 295 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 TBC1D10BQ4KMP7 808 aaPredicted RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 NBPF10Q6P3W6 841 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 NUTM1Q86Y26 1132 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 SULF1Q8IWU6 871 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 LRCH3Q96II8 777 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 EPAS1Q99814 870 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 R3HDMLQ9H3Y0 253 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 GGA3Q9NZ52 723 aa6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 RBM27Q9P2N5 1060 aaKnown RBP6.53□□□□□ -1.36
NPIPB3-211ENST00000542953 ZNF609O15014 1411 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 TRIM6-TRIM34B2RNG4 842 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 ERVV-1B6SEH8 477 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 PSMD14O00487 310 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 NRG2O14511 850 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 SREBF2Q12772 1141 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 TMX4Q9H1E5 349 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 EMILIN3Q9NT22 766 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 SEPT9Q9UHD8 586 aaPredicted RBP6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 TRIM17Q9Y577 477 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 DUOX1Q9NRD9 1551 aa6.52□□□□□ -1.37
NPIPB3-211ENST00000542953 ABCC4O15439 1325 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 UBN2Q6ZU65 1347 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 TCERG1O14776 1098 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 KCNQ3O43525 872 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 BBOX1O75936 387 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 NTSR2O95665 410 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 ALDH1A1P00352 501 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 HMOX1P09601 288 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 SNRPA1P09661 255 aaKnown RBP6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 KIF4BQ2VIQ3 1234 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 NECTIN2Q92692 538 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 ZNF333Q96JL9 665 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 PTPN22Q9Y2R2 807 aa6.51□□□□□ -1.37
NPIPB3-211ENST00000542953 ASTN2O75129 1339 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 RTL9Q8NET4 1388 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 A0A1W2PPC1 479 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 ZNF280AP59817 542 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 MPNDQ8N594 471 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 PCGF6Q9BYE7 350 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 V9GY48 417 aaPredicted RBP6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 MAP3K15Q6ZN16 1313 aa6.5□□□□□ -1.37
NPIPB3-211ENST00000542953 MUC3AQ02505 3323 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 BTBD11A6QL63 1104 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 UBE2Q2LH0YL09 131 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 VIL1P09327 827 aaKnown RBP6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 SLC10A5Q5PT55 438 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 SUSD4Q5VX71 490 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 MOB2Q70IA6 237 aa6.49□□□□□ -1.37
NPIPB3-211ENST00000542953 MORC1Q86VD1 984 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms