RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TTC16Q8NEE8 873 aa5.06□□□□□ -1.6
KNTC1-213ENST00000542727 HELQQ8TDG4 1101 aa5.06□□□□□ -1.6
KNTC1-213ENST00000542727 UTP4Q969X6 686 aaKnown RBP5.06□□□□□ -1.6
KNTC1-213ENST00000542727 NUDT16Q96DE0 195 aaKnown RBP5.06□□□□□ -1.6
KNTC1-213ENST00000542727 HIF3AQ9Y2N7 669 aa5.06□□□□□ -1.6
KNTC1-213ENST00000542727 KIAA1324LA8MWY0 1029 aaPredicted RBP5.05□□□□□ -1.6
KNTC1-213ENST00000542727 TM4SF5O14894 197 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 ZBTB39O15060 712 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 EIF4EBP3O60516 100 aaPredicted RBP5.05□□□□□ -1.6
KNTC1-213ENST00000542727 COBLO75128 1261 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 EPHA1P21709 976 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 GRIK1P39086 918 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 INTS5Q6P9B9 1019 aaKnown RBP5.05□□□□□ -1.6
KNTC1-213ENST00000542727 FAM46AQ96IP4 442 aaKnown RBP5.05□□□□□ -1.6
KNTC1-213ENST00000542727 MYRFLQ96LU7 910 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 UBL7Q96S82 380 aaPredicted RBP5.05□□□□□ -1.6
KNTC1-213ENST00000542727 TMEM63CQ9P1W3 806 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 SALL4Q9UJQ4 1053 aa5.05□□□□□ -1.6
KNTC1-213ENST00000542727 WISP1O95388 367 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 CYP2E1P05181 493 aaPredicted RBP5.04□□□□□ -1.6
KNTC1-213ENST00000542727 MZF1P28698 734 aaPredicted RBP5.04□□□□□ -1.6
KNTC1-213ENST00000542727 ARL4DP49703 201 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 NFIAQ12857 509 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 MCTP1Q6DN14 999 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 ALKBH2Q6NS38 261 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 TXNDC11Q6PKC3 985 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.04□□□□□ -1.6
KNTC1-213ENST00000542727 KIAA1211Q6ZU35 1233 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 ARMC10Q8N2F6 343 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 POP1Q99575 1024 aaKnown RBP5.04□□□□□ -1.6
KNTC1-213ENST00000542727 DBNDD2Q9BQY9 259 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 ZMYND15Q9H091 742 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 RNF208Q9H0X6 261 aa5.04□□□□□ -1.6
KNTC1-213ENST00000542727 SART1O43290 800 aaKnown RBP5.03□□□□□ -1.6
KNTC1-213ENST00000542727 CES1P23141 567 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 SSTR4P31391 388 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 EHHADHQ08426 723 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 NOM1Q5C9Z4 860 aaKnown RBP5.03□□□□□ -1.6
KNTC1-213ENST00000542727 RNF43Q68DV7 783 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 CLEC10AQ8IUN9 316 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 EDEM1Q92611 657 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 CARD10Q9BWT7 1032 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 MTMR7Q9Y216 660 aa5.03□□□□□ -1.6
KNTC1-213ENST00000542727 COL17A1Q9UMD9 1497 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-213ENST00000542727 PDE2AO00408 941 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-213ENST00000542727 PDGFAP04085 211 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 USP5P45974 858 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 ZDHHC13Q8IUH4 622 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 FAM20CQ8IXL6 584 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 TMEM102Q8N9M5 508 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-213ENST00000542727 FOXD4L4Q8WXT5 416 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-213ENST00000542727 C7orf69Q9H7B7 122 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 SH2B1Q9NRF2 756 aaPredicted RBP5.02□□□□□ -1.61
KNTC1-213ENST00000542727 DZANK1Q9NVP4 752 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 KCNK4Q9NYG8 393 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 KANSL3Q9P2N6 904 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 SEPT3Q9UH03 358 aa5.02□□□□□ -1.61
KNTC1-213ENST00000542727 MEGF11A6BM72 1044 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 BTBD11A6QL63 1104 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 NFKBIEO00221 500 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 PAX4O43316 350 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 ADAM11O75078 769 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 TGFB1P01137 390 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 EDN3P14138 238 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 CDC25BP30305 580 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 DNM1Q05193 864 aaKnown RBP5.01□□□□□ -1.61
KNTC1-213ENST00000542727 CPSF6Q16630 551 aaKnown RBP eCLIP5.01□□□□□ -1.61
KNTC1-213ENST00000542727 FDX2Q6P4F2 183 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 ATCAYQ86WG3 371 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 C1orf127Q8N9H9 656 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 GIMAP7Q8NHV1 300 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 UBASH3BQ8TF42 649 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 KLHDC7BQ96G42 594 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 FAM83CQ9BQN1 747 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 RUSC1Q9BVN2 902 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 SOX17Q9H6I2 414 aaPredicted RBP5.01□□□□□ -1.61
KNTC1-213ENST00000542727 CNTN3Q9P232 1028 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 SLAIN2Q9P270 581 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 SOX13Q9UN79 622 aa5.01□□□□□ -1.61
KNTC1-213ENST00000542727 PPP1R15AO75807 674 aaPredicted RBP5□□□□□ -1.61
KNTC1-213ENST00000542727 EIF1AXP47813 144 aaKnown RBP5□□□□□ -1.61
KNTC1-213ENST00000542727 IRAK1P51617 712 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 C19orf57Q0VDD7 668 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 C8orf34Q49A92 452 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 ADAMTSL4Q6UY14 1074 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 TRIM42Q8IWZ5 723 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 SNX29Q8TEQ0 813 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 BSNDQ8WZ55 320 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
KNTC1-213ENST00000542727 HMX2A2RU54 273 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 GAS2O43903 313 aaKnown RBP4.99□□□□□ -1.61
KNTC1-213ENST00000542727 FAM13AO94988 1023 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 BMP3P12645 472 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 NPR3P17342 541 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 SPINK2P20155 84 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 MPSTP25325 297 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 BEND4Q6ZU67 534 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 CHRDQ9H2X0 955 aa4.99□□□□□ -1.61
KNTC1-213ENST00000542727 KCNF1Q9H3M0 494 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms