RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 COL17A1Q9UMD9 1497 aaPredicted RBP10□□□□□ -0.81
SRGAP1-204ENST00000542381 COBLO75128 1261 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 NCAPG2Q86XI2 1143 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 ZDHHC13Q8IUH4 622 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 TRIM42Q8IWZ5 723 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 UBASH3BQ8TF42 649 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 KLHDC7BQ96G42 594 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 TMEM63CQ9P1W3 806 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 SLAIN2Q9P270 581 aa10□□□□□ -0.81
SRGAP1-204ENST00000542381 ATG7O95352 703 aa9.99□□□□□ -0.81
SRGAP1-204ENST00000542381 FAM117BQ6P1L5 589 aa9.99□□□□□ -0.81
SRGAP1-204ENST00000542381 KLHL23Q8NBE8 558 aa9.99□□□□□ -0.81
SRGAP1-204ENST00000542381 HMX2A2RU54 273 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 KIAA1324LA8MWY0 1029 aaPredicted RBP9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 NFIAQ12857 509 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 ATCAYQ86WG3 371 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 ADAM19Q9H013 955 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 ELP3Q9H9T3 547 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 GOLGA2P5Q9HBQ8 144 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 CNTN3Q9P232 1028 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 KANSL3Q9P2N6 904 aa9.98□□□□□ -0.81
SRGAP1-204ENST00000542381 ADAMTS4O75173 837 aa9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 PTPRAP18433 802 aa9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 UVSSAQ2YD98 709 aa9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 ABTB2Q8N961 1025 aa9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 CLP1Q92989 425 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 SEPT3Q9UH03 358 aa9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 OAS3Q9Y6K5 1087 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-204ENST00000542381 ACPPP15309 386 aa9.96□□□□□ -0.82
SRGAP1-204ENST00000542381 MYRFLQ96LU7 910 aa9.96□□□□□ -0.82
SRGAP1-204ENST00000542381 SEC31BQ9NQW1 1179 aa9.96□□□□□ -0.82
SRGAP1-204ENST00000542381 RNF43Q68DV7 783 aa9.95□□□□□ -0.82
SRGAP1-204ENST00000542381 PDE12Q6L8Q7 609 aaKnown RBP9.95□□□□□ -0.82
SRGAP1-204ENST00000542381 PRR19A6NJB7 356 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 IRAK1P51617 712 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 GP2P55259 537 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 ZNF438Q7Z4V0 828 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 KRTAP9-9Q9BYP9 154 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 KRTAP9-4Q9BYQ2 154 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 SALL4Q9UJQ4 1053 aa9.94□□□□□ -0.82
SRGAP1-204ENST00000542381 H3BRJ5 948 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 NFKBIEO00221 500 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 TRPA1O75762 1119 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 FAM20CQ8IXL6 584 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 DBNDD2Q9BQY9 259 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 ZMYND15Q9H091 742 aa9.93□□□□□ -0.82
SRGAP1-204ENST00000542381 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
SRGAP1-204ENST00000542381 SPINK2P20155 84 aa9.92□□□□□ -0.82
SRGAP1-204ENST00000542381 PREPP48147 710 aa9.92□□□□□ -0.82
SRGAP1-204ENST00000542381 NLRP12P59046 1061 aa9.92□□□□□ -0.82
SRGAP1-204ENST00000542381 HHIPQ96QV1 700 aa9.92□□□□□ -0.82
SRGAP1-204ENST00000542381 PAX4O43316 350 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 BMP3P12645 472 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 ATP2B4P23634 1241 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 HGSNATQ68CP4 663 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 CLEC10AQ8IUN9 316 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 EDEM1Q92611 657 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 FAM83CQ9BQN1 747 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 GGNBP2Q9H3C7 697 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 DZANK1Q9NVP4 752 aa9.91□□□□□ -0.82
SRGAP1-204ENST00000542381 A6NHS1 94 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 SART1O43290 800 aaKnown RBP9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 TAL1P17542 331 aaPredicted RBP9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 CES1P23141 567 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 CABP4P57796 275 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 BEND4Q6ZU67 534 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 SHKBP1Q8TBC3 707 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 SLC7A3Q8WY07 619 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 KCNF1Q9H3M0 494 aa9.9□□□□□ -0.82
SRGAP1-204ENST00000542381 GRIK1P39086 918 aa9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 ANKRD34AQ69YU3 496 aa9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 WNT8BQ93098 351 aa9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 OSGEPQ9NPF4 335 aa9.89□□□□□ -0.83
SRGAP1-204ENST00000542381 PDE2AO00408 941 aaPredicted RBP9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 DNM1Q05193 864 aaKnown RBP9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 DTX1Q86Y01 620 aa9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 FMNL2Q96PY5 1086 aa9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 RUSC1Q9BVN2 902 aa9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 RNF208Q9H0X6 261 aa9.88□□□□□ -0.83
SRGAP1-204ENST00000542381 CHRDQ9H2X0 955 aa9.87□□□□□ -0.83
SRGAP1-204ENST00000542381 SOX13Q9UN79 622 aa9.87□□□□□ -0.83
SRGAP1-204ENST00000542381 PDGFAP04085 211 aa9.86□□□□□ -0.83
SRGAP1-204ENST00000542381 C8orf34Q49A92 452 aa9.86□□□□□ -0.83
SRGAP1-204ENST00000542381 BTBD11A6QL63 1104 aa9.85□□□□□ -0.83
SRGAP1-204ENST00000542381 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
SRGAP1-204ENST00000542381 TXKP42681 527 aa9.85□□□□□ -0.83
SRGAP1-204ENST00000542381 FDX2Q6P4F2 183 aa9.85□□□□□ -0.83
SRGAP1-204ENST00000542381 PBXIP1Q96AQ6 731 aa9.85□□□□□ -0.83
SRGAP1-204ENST00000542381 WDR64B1ANS9 1081 aa9.84□□□□□ -0.83
SRGAP1-204ENST00000542381 HOXA10P31260 410 aaPredicted RBP9.84□□□□□ -0.83
SRGAP1-204ENST00000542381 C19orf57Q0VDD7 668 aa9.84□□□□□ -0.83
SRGAP1-204ENST00000542381 NOM1Q5C9Z4 860 aaKnown RBP9.84□□□□□ -0.83
SRGAP1-204ENST00000542381 HELQQ8TDG4 1101 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms