RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ACSBG1Q96GR2 724 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
GCFC2-211ENST00000541687 ARHGEF40Q8TER5 1519 aa16.76■□□□□ 0.27
GCFC2-211ENST00000541687 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
GCFC2-211ENST00000541687 SSH2Q76I76 1423 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 ERICH4A6NGS2 130 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 ZFYP08048 801 aaPredicted RBP16.75■□□□□ 0.27
GCFC2-211ENST00000541687 INO80Q9ULG1 1556 aaPredicted RBP16.75■□□□□ 0.27
GCFC2-211ENST00000541687 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 KDRP35968 1356 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 PLEKHG1Q9ULL1 1385 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 NR1I2O75469 434 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
GCFC2-211ENST00000541687 SNW1Q13573 536 aaKnown RBP16.74■□□□□ 0.27
GCFC2-211ENST00000541687 CCDC102BQ68D86 513 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 MED14O60244 1454 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 SETD1BQ9UPS6 1966 aaKnown RBP16.74■□□□□ 0.27
GCFC2-211ENST00000541687 A0A087WWV3 80 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 IL2RBP14784 551 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 SMARCE1Q969G3 411 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 PRM3Q9NNZ6 103 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 SASH1O94885 1247 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 ATP5JP18859 108 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 TTF1Q15361 905 aaPredicted RBP16.74■□□□□ 0.27
GCFC2-211ENST00000541687 CAGE1Q8TC20 777 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 XAGE2Q96GT9 111 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 MYL10Q9BUA6 226 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 ZSWIM4Q9H7M6 989 aa16.74■□□□□ 0.27
GCFC2-211ENST00000541687 CAVIN2O95810 425 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 RUFY1Q96T51 708 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 IFNKQ9P0W0 207 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 CCDC196A0A1B0GTZ2 297 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 PHKG2P15735 406 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 UBASH3AP57075 661 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 LRMPQ12912 555 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 B4E1Z4 1266 aa16.73■□□□□ 0.27
GCFC2-211ENST00000541687 IRS4O14654 1257 aaPredicted RBP16.73■□□□□ 0.27
GCFC2-211ENST00000541687 NLRP1Q9C000 1473 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 AFMP43652 599 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 CAVIN4Q5BKX8 364 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 ARHGEF25Q86VW2 580 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 CLSTN2Q9H4D0 955 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 SLC4A4Q9Y6R1 1079 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 GSDMDP57764 484 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 POLA2Q14181 598 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 MAGEC2Q9UBF1 373 aaPredicted RBP16.72■□□□□ 0.27
GCFC2-211ENST00000541687 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 NEXMIFQ5QGS0 1516 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 TAF5LO75529 589 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 ZAP70P43403 619 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 PIP4K2BP78356 416 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 WTAPQ15007 396 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 GTF3C6Q969F1 213 aa16.72■□□□□ 0.27
GCFC2-211ENST00000541687 NEMFO60524 1076 aa16.71■□□□□ 0.27
GCFC2-211ENST00000541687 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
GCFC2-211ENST00000541687 IL25Q9H293 177 aa16.71■□□□□ 0.27
GCFC2-211ENST00000541687 HELLSQ9NRZ9 838 aa16.71■□□□□ 0.27
GCFC2-211ENST00000541687 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
GCFC2-211ENST00000541687 MAGEB6Q8N7X4 407 aa16.71■□□□□ 0.27
GCFC2-211ENST00000541687 CTCFLQ8NI51 663 aaPredicted RBP16.71■□□□□ 0.27
GCFC2-211ENST00000541687 FTOQ9C0B1 505 aaKnown RBP eCLIP16.71■□□□□ 0.27
GCFC2-211ENST00000541687 E7EWF7 191 aa16.71■□□□□ 0.26
GCFC2-211ENST00000541687 GPAA1O43292 621 aa16.71■□□□□ 0.26
GCFC2-211ENST00000541687 DNAJC10Q8IXB1 793 aa16.71■□□□□ 0.26
GCFC2-211ENST00000541687 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.26
GCFC2-211ENST00000541687 KIDINS220Q9ULH0 1771 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
GCFC2-211ENST00000541687 CYP7A1P22680 504 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 FAM160A1Q05DH4 1040 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 SPECC1Q5M775 1068 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 PHKBQ93100 1093 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 DNAI1Q9UI46 699 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 CEP131Q9UPN4 1083 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 CYP21A2P08686 494 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 USP28Q96RU2 1077 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 PUS3Q9BZE2 481 aaKnown RBP16.7■□□□□ 0.26
GCFC2-211ENST00000541687 CPS1P31327 1500 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 EPB41L2O43491 1005 aaKnown RBP16.7■□□□□ 0.26
GCFC2-211ENST00000541687 ITGA6P23229 1130 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 CDK5RAP3Q96JB5 506 aa16.7■□□□□ 0.26
GCFC2-211ENST00000541687 IKQ13123 557 aaPredicted RBP16.69■□□□□ 0.26
GCFC2-211ENST00000541687 EPHA10Q5JZY3 1008 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 H0YHG0 523 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
GCFC2-211ENST00000541687 NLRP5P59047 1200 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 DZIP3Q86Y13 1208 aaKnown RBP16.69■□□□□ 0.26
GCFC2-211ENST00000541687 ZHX3Q9H4I2 956 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 NRXN1Q9ULB1 1477 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
GCFC2-211ENST00000541687 JAG2Q9Y219 1238 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 VWDEQ8N2E2 1590 aa16.69■□□□□ 0.26
GCFC2-211ENST00000541687 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
GCFC2-211ENST00000541687 ZNF75DP51815 510 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms