RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 FAAH2Q6GMR7 532 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 NME9Q86XW9 330 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 THOC1Q96FV9 657 aaKnown RBP7.17□□□□□ -1.26
LMO3-225ENST00000541295 ZRANB1Q9UGI0 708 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 ZNF652Q9Y2D9 606 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 MNAT1P51948 309 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 MYSM1Q5VVJ2 828 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 IP6K2Q9UHH9 426 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
LMO3-225ENST00000541295 BLMP54132 1417 aaPredicted RBP7.16□□□□□ -1.26
LMO3-225ENST00000541295 PDE4AP27815 886 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 DHX36Q9H2U1 1008 aaKnown RBP7.16□□□□□ -1.26
LMO3-225ENST00000541295 UBAP1Q9NZ09 502 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 N6AMT1Q9Y5N5 214 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 MTA2O94776 668 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 LDHCP07864 332 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 NASPP49321 788 aaPredicted RBP7.16□□□□□ -1.26
LMO3-225ENST00000541295 RPS6KA3P51812 740 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 NUCB2P80303 420 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 PSME1Q06323 249 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 EIF2B5Q13144 721 aaKnown RBP7.16□□□□□ -1.26
LMO3-225ENST00000541295 SEPT2Q15019 361 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 NEK9Q8TD19 979 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.16□□□□□ -1.26
LMO3-225ENST00000541295 RCAN3Q9UKA8 241 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 CCDC61Q9Y6R9 512 aa7.16□□□□□ -1.26
LMO3-225ENST00000541295 KCNA6P17658 529 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 PRPHP41219 470 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 EVA1CP58658 441 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 RNF20Q5VTR2 975 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 SUGP1Q8IWZ8 645 aaKnown RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 DRAXINQ8NBI3 349 aaPredicted RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 SMARCC1Q92922 1105 aaPredicted RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 INCENPQ9NQS7 918 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 SETD1AO15047 1707 aaKnown RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 PRR36Q9H6K5 1346 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 ERLIN1O75477 346 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 TRIM21P19474 475 aaKnown RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 SFSWAPQ12872 951 aaKnown RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 TEX35Q5T0J7 233 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 ANKLE2Q86XL3 938 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 ARMC2Q8NEN0 867 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 BAG1Q99933 345 aaPredicted RBP7.15□□□□□ -1.26
LMO3-225ENST00000541295 COMMD8Q9NX08 183 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 SPATA7Q9P0W8 599 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 DLC1Q96QB1 1528 aa7.15□□□□□ -1.26
LMO3-225ENST00000541295 PLIN1O60240 522 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 E2F6O75461 281 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 MMEP08473 750 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 IL4RP24394 825 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 HNRNPH2P55795 449 aaKnown RBP7.15□□□□□ -1.27
LMO3-225ENST00000541295 KIF4BQ2VIQ3 1234 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 NAALADL2Q58DX5 795 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 ANKRD13DQ6ZTN6 518 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 FNBP4Q8N3X1 1017 aaPredicted RBP7.15□□□□□ -1.27
LMO3-225ENST00000541295 CDK5RAP3Q96JB5 506 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 YIPF2Q9BWQ6 316 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 SEL1LQ9UBV2 794 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 CLIP2Q9UDT6 1046 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 MORC2Q9Y6X9 1032 aaPredicted RBP7.15□□□□□ -1.27
LMO3-225ENST00000541295 PTPRUQ92729 1446 aa7.15□□□□□ -1.27
LMO3-225ENST00000541295 NSD2O96028 1365 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 MYO1CO00159 1063 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 SNUPNO95149 360 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 TGFB3P10600 412 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 GOLGA2Q08379 1002 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 DCTN1Q14203 1278 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 E2F4Q16254 413 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 LEKR1Q6ZMV7 388 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 CCDC186Q7Z3E2 898 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 NGDNQ8NEJ9 315 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 CENPTQ96BT3 561 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 MYCLP1P12525 358 aaPredicted RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 GPS2Q13227 327 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 PDE3BQ13370 1112 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 BIRC3Q13489 604 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 AKNAD1Q5T1N1 836 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
LMO3-225ENST00000541295 PCGF5Q86SE9 256 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 SAMD14Q8IZD0 417 aaPredicted RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 KRT222Q8N1A0 295 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 TXLNBQ8N3L3 684 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 USP33Q8TEY7 942 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 PLEKHG4BQ96PX9 1271 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 MPHOSPH6Q99547 160 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 MAK16Q9BXY0 300 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 DMRT2Q9Y5R5 561 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 CD163L1Q9NR16 1453 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 POLR3AO14802 1390 aaPredicted RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 CEP170BQ9Y4F5 1589 aaPredicted RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 REC8O95072 547 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 ERCC5P28715 1186 aaPredicted RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 RRS1Q15050 365 aaKnown RBP7.14□□□□□ -1.27
LMO3-225ENST00000541295 CCDC152Q4G0S7 254 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 CCDC30Q5VVM6 783 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 TMEM110Q86TL2 294 aa7.14□□□□□ -1.27
LMO3-225ENST00000541295 GABPB2Q8TAK5 448 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms