RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 ZMYM1Q5SVZ6 1142 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 TPTE2Q6XPS3 522 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 DEFB132Q7Z7B7 95 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 PIH1D3Q9NQM4 214 aaKnown RBP14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 CARMIL3Q8ND23 1372 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 MAST3O60307 1309 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 CYP2E1P05181 493 aaPredicted RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 HSP90B1P14625 803 aaKnown RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 ARID4AP29374 1257 aaPredicted RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 VPS53Q5VIR6 699 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 PRR5LQ6MZQ0 368 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 ANKRD18AQ8IVF6 992 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 CDC5LQ99459 802 aaKnown RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 MYH7P12883 1935 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 A0A0G2JLW4 131 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 SLC27A2O14975 620 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 PLSCR1O15162 318 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 RNF113AO15541 343 aaKnown RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 SLC5A1P13866 664 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 BCAMP50895 628 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 MCMDC2Q4G0Z9 681 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 CREB3L3Q68CJ9 461 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 NOL8Q76FK4 1167 aaKnown RBP14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 OSBP2Q969R2 916 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 NLRP3Q96P20 1036 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 MINPP1Q9UNW1 487 aa14.78□□□□□ -0.04
AP003559.1-201ENST00000540906 KLRK1P26718 216 aa14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 EN1Q05925 392 aaPredicted RBP14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 SF3B2Q13435 895 aaKnown RBP14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 ZNF512BQ96KM6 892 aaPredicted RBP14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 BSDC1Q9NW68 430 aaPredicted RBP14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 HMG20BQ9P0W2 317 aa14.77□□□□□ -0.05
AP003559.1-201ENST00000540906 RASGRF1Q13972 1273 aa14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 COL23A1Q86Y22 540 aaPredicted RBP14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 CNBD1Q8NA66 436 aa14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 TTC14Q96N46 770 aa14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 ST18O60284 1047 aa14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 LARP6Q9BRS8 491 aaKnown RBP14.76□□□□□ -0.05
AP003559.1-201ENST00000540906 COL1A1P02452 1464 aaPredicted RBP14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 FOXP2O15409 715 aa14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 SERPINB2P05120 415 aa14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 NFKBIBQ15653 356 aa14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 ZGPATQ8N5A5 531 aaKnown RBP14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 HELLSQ9NRZ9 838 aa14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 DOCK2Q92608 1830 aa14.75□□□□□ -0.05
AP003559.1-201ENST00000540906 POLRMTO00411 1230 aaKnown RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 GYG1P46976 350 aa14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 EZH2Q15910 746 aaKnown RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 UPF1Q92900 1129 aaKnown RBP eCLIP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 TMX3Q96JJ7 454 aa14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 JAKMIP1Q96N16 626 aaKnown RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 PUS7LQ9H0K6 701 aaKnown RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 TFCP2L1Q9NZI6 479 aa14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 WWC3Q9ULE0 1092 aa14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 IQSEC3Q9UPP2 1182 aaPredicted RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 RPAP1Q9BWH6 1393 aaPredicted RBP14.74□□□□□ -0.05
AP003559.1-201ENST00000540906 FRAT2O75474 233 aaPredicted RBP14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 CASTP20810 708 aaKnown RBP14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 KCNJ4P48050 445 aa14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 ANKRD31Q8N7Z5 1873 aa14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 NPHP1O15259 732 aa14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 UQCRFS1P1P0C7P4 283 aa14.73□□□□□ -0.05
AP003559.1-201ENST00000540906 HSPD1P10809 573 aaKnown RBP14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 ADD2P35612 726 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 AK2P54819 239 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 STOX1Q6ZVD7 989 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 ANO8Q9HCE9 1232 aaPredicted RBP14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 CHMP5Q9NZZ3 219 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 ZNF804BA4D1E1 1349 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 PNPLA7Q6ZV29 1317 aa14.72□□□□□ -0.05
AP003559.1-201ENST00000540906 RGPD3A6NKT7 1758 aaPredicted RBP14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 RGPD4Q7Z3J3 1758 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 TCRBV5S4A2TA0A5A2 114 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 LARGE1O95461 756 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 CYP21A2P08686 494 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 WASHC4Q2M389 1173 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 IRS2Q9Y4H2 1338 aa14.71□□□□□ -0.05
AP003559.1-201ENST00000540906 DTNBO60941 627 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 IDH1O75874 414 aaKnown RBP14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 BAG6P46379 1132 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 UBE4AQ14139 1066 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 TTLL5Q6EMB2 1281 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 TXNRD3Q86VQ6 643 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 APPBP2Q92624 585 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 FAM84BQ96KN1 310 aaPredicted RBP14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 LAMA4Q16363 1823 aa14.71□□□□□ -0.06
AP003559.1-201ENST00000540906 NRXN2Q9P2S2 1712 aa14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 HSP90AA1P07900 732 aaKnown RBP14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 PDE6AP16499 860 aa14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 GRAPQ13588 217 aa14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 CRY2Q49AN0 593 aa14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 SLC9C2Q5TAH2 1124 aa14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 GRAPLQ8TC17 118 aaPredicted RBP14.7□□□□□ -0.06
AP003559.1-201ENST00000540906 TM6SF1Q9BZW5 370 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms