RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TAOK3Q9H2K8 898 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 DACH1Q9UI36 760 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 SBF1O95248 1867 aa6.36□□□□□ -1.39
SNHG1-214ENST00000540865 WFS1O76024 890 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 CYP19A1P11511 503 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-214ENST00000540865 JUNDP17535 347 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 PDE6BP35913 854 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 MSS51Q4VC12 460 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 CDCA8Q53HL2 280 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 C1orf141Q5JVX7 400 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 ZNF530Q6P9A1 599 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-214ENST00000540865 PNMA8AQ86V59 439 aaPredicted RBP6.35□□□□□ -1.39
SNHG1-214ENST00000540865 DNAJC10Q8IXB1 793 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 CARD14Q9BXL6 1004 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 POLKQ9UBT6 870 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 HACL1Q9UJ83 578 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 GTF3C3Q9Y5Q9 886 aa6.35□□□□□ -1.39
SNHG1-214ENST00000540865 CARMIL3Q8ND23 1372 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 DXOO77932 396 aaKnown RBP6.34□□□□□ -1.39
SNHG1-214ENST00000540865 ECE1P42892 770 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 FOXC1Q12948 553 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 EAPPQ56P03 285 aaPredicted RBP6.34□□□□□ -1.39
SNHG1-214ENST00000540865 STYK1Q6J9G0 422 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 CNTROBQ8N137 903 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 LRRN4Q8WUT4 740 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 CNKSR1Q969H4 720 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 SNRKQ9NRH2 765 aa6.34□□□□□ -1.39
SNHG1-214ENST00000540865 ABT1Q9ULW3 272 aaKnown RBP6.34□□□□□ -1.39
SNHG1-214ENST00000540865 COL5A3P25940 1745 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 PDE4DIPQ5VU43 2346 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 COL15A1P39059 1388 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 TNRC18O15417 2968 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 CA12O43570 354 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 USP17L8P0C7I0 530 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 EPHX2P34913 555 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 MAP2K2P36507 400 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 MMP16P51512 607 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 MAP1SQ66K74 1059 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 HELBQ8NG08 1087 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 CAPNS2Q96L46 248 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 GPR101Q96P66 508 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 MCOLN1Q9GZU1 580 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 HMX1Q9NP08 348 aaPredicted RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 PKD2L1Q9P0L9 805 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 GMPR2Q9P2T1 348 aaKnown RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 ZBTB1Q9Y2K1 713 aa6.33□□□□□ -1.4
SNHG1-214ENST00000540865 MYH14Q7Z406 1995 aaKnown RBP6.33□□□□□ -1.4
SNHG1-214ENST00000540865 A0A087WZG4 1122 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 SRGNP10124 158 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 EIF5P55010 431 aaKnown RBP6.32□□□□□ -1.4
SNHG1-214ENST00000540865 TMEM259Q4ZIN3 620 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 PRR5LQ6MZQ0 368 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 PRPF40BQ6NWY9 871 aaKnown RBP6.32□□□□□ -1.4
SNHG1-214ENST00000540865 LYPD8Q6UX82 237 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 BICDL1Q6ZP65 573 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 CCDC24Q8N4L8 307 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 MASTLQ96GX5 879 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 DDX21Q9NR30 783 aaKnown RBP eCLIP6.32□□□□□ -1.41e-323■■■□□ 15.6
SNHG1-214ENST00000540865 STK17AQ9UEE5 414 aa6.32□□□□□ -1.4
SNHG1-214ENST00000540865 FCF1Q9Y324 198 aaKnown RBP6.32□□□□□ -1.4
SNHG1-214ENST00000540865 ZNF541Q9H0D2 1346 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 TIAM2Q8IVF5 1701 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 FKBP4Q02790 459 aaKnown RBP eCLIP6.31□□□□□ -1.4
SNHG1-214ENST00000540865 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
SNHG1-214ENST00000540865 CCDC93Q567U6 631 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 AKAP4Q5JQC9 854 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 TBC1D9BQ66K14 1250 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 DESI1Q6ICB0 168 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 GPC2Q8N158 579 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 CRIPAKQ8N1N5 446 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 EPS8L1Q8TE68 723 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 NUDT12Q9BQG2 462 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 SLC52A2Q9HAB3 445 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 MAP10Q9P2G4 905 aa6.31□□□□□ -1.4
SNHG1-214ENST00000540865 NRXN2Q9P2S2 1712 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 ADAMTS7Q9UKP4 1686 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 FZD9O00144 591 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 STARD3NLO95772 234 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 CANXP27824 592 aaKnown RBP6.3□□□□□ -1.4
SNHG1-214ENST00000540865 ST5P78524 1137 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 PTPRNQ16849 979 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 PTCRAQ6ISU1 281 aaPredicted RBP6.3□□□□□ -1.4
SNHG1-214ENST00000540865 RTKN2Q8IZC4 609 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 CNBD1Q8NA66 436 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 MTMR14Q8NCE2 650 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
SNHG1-214ENST00000540865 RNF123Q5XPI4 1314 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 NPHP1O15259 732 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 CCNYL3P0C7X3 344 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 NPR1P16066 1061 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 CTHP32929 405 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 GRM1Q13255 1194 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 SLC39A6Q13433 755 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 DGKZQ13574 1117 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 MCM6Q14566 821 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 NR6A1Q15406 480 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 LCE2CQ5TA81 110 aa6.29□□□□□ -1.4
SNHG1-214ENST00000540865 CST9Q5W186 159 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms