RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PUS7LQ9H0K6 701 aaKnown RBP16.05■□□□□ 0.16
BNIP3-202ENST00000540159 INCENPQ9NQS7 918 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 FILIP1Q7Z7B0 1213 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 ZNF592Q92610 1267 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 XAGE2Q96GT9 111 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 CLSTN2Q9H4D0 955 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 AIFM3Q96NN9 605 aa16.05■□□□□ 0.16
BNIP3-202ENST00000540159 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
BNIP3-202ENST00000540159 RNF113AO15541 343 aaKnown RBP16.04■□□□□ 0.16
BNIP3-202ENST00000540159 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
BNIP3-202ENST00000540159 ZMYM1Q5SVZ6 1142 aa16.04■□□□□ 0.16
BNIP3-202ENST00000540159 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 TSGA10IPQ3SY00 556 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 IDH1O75874 414 aaKnown RBP16.03■□□□□ 0.16
BNIP3-202ENST00000540159 CCDC144BQ3MJ40 725 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 DDX19AQ9NUU7 478 aaKnown RBP16.03■□□□□ 0.16
BNIP3-202ENST00000540159 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
BNIP3-202ENST00000540159 ELP1O95163 1332 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 KLF18A0A0U1RQI7 1052 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 PFKFB2O60825 505 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 FGAP02671 866 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 HLFQ16534 295 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 CLIP2Q9UDT6 1046 aa16.03■□□□□ 0.16
BNIP3-202ENST00000540159 MST1RQ04912 1400 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 GOLGA8BA8MQT2 603 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 GOLGA6L19H0YKK7 550 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 PTPN21Q16825 1174 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 MYL10Q9BUA6 226 aa16.02■□□□□ 0.16
BNIP3-202ENST00000540159 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.02■□□□□ 0.165e-18■■□□□ 11.6
BNIP3-202ENST00000540159 SCN11AQ9UI33 1791 aa16.02■□□□□ 0.15
BNIP3-202ENST00000540159 UBE2Q2LH0YL09 131 aa16.02■□□□□ 0.15
BNIP3-202ENST00000540159 SF3A1Q15459 793 aaKnown RBP16.02■□□□□ 0.15
BNIP3-202ENST00000540159 ZMYND15Q9H091 742 aa16.02■□□□□ 0.15
BNIP3-202ENST00000540159 CFAP45Q9UL16 551 aa16.02■□□□□ 0.15
BNIP3-202ENST00000540159 SPATA31A3Q5VYP0 1347 aa16.02■□□□□ 0.15
BNIP3-202ENST00000540159 BECN2A8MW95 431 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 ADD1P35611 737 aaKnown RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 METTL24Q5JXM2 366 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 CCDC73Q6ZRK6 1079 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 ILDR1Q86SU0 546 aaPredicted RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 CCDC82Q8N4S0 544 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 SDF4Q9BRK5 362 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 TRPM3Q9HCF6 1732 aaPredicted RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 RIOK3O14730 519 aaKnown RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 MARCKSP29966 332 aaPredicted RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
BNIP3-202ENST00000540159 TBC1D2BQ9UPU7 963 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 CLIC4Q9Y696 253 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
BNIP3-202ENST00000540159 GOLGA6L6A8MZA4 724 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 PRC1O43663 620 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 KINO60870 393 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 FDPSP14324 419 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 LDHAL6AQ6ZMR3 332 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 BRINP3Q76B58 766 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 GREM2Q9H772 168 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 TMOD3Q9NYL9 352 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 DYNC1I1O14576 645 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 CPLX1O14810 134 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 ZNF75DP51815 510 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 MYRIPQ8NFW9 859 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 SENP2Q9HC62 589 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 TRMT1Q9NXH9 659 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 FOXP2O15409 715 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 IL2RBP14784 551 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 EXOSC10Q01780 885 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 IFIT5Q13325 482 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 CCDC191Q8NCU4 936 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 CACTINQ8WUQ7 758 aaKnown RBP16■□□□□ 0.15
BNIP3-202ENST00000540159 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 HELLSQ9NRZ9 838 aa16■□□□□ 0.15
BNIP3-202ENST00000540159 JCADQ9P266 1359 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 SMARCC2Q8TAQ2 1214 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 RALYLQ86SE5 291 aaKnown RBP15.99■□□□□ 0.15
BNIP3-202ENST00000540159 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 AOPEPQ8N6M6 819 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 PHKBQ93100 1093 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 DSCC1Q9BVC3 393 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
BNIP3-202ENST00000540159 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
BNIP3-202ENST00000540159 GPAA1O43292 621 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 MICU3Q86XE3 530 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 ZSCAN16Q9H4T2 348 aaPredicted RBP15.98■□□□□ 0.15
BNIP3-202ENST00000540159 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 PHRF1Q9P1Y6 1649 aaKnown RBP15.98■□□□□ 0.15
BNIP3-202ENST00000540159 SPDYE4A6NLX3 237 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 STK38Q15208 465 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 IMMTQ16891 758 aaKnown RBP15.98■□□□□ 0.15
BNIP3-202ENST00000540159 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 SLC9C2Q5TAH2 1124 aa15.98■□□□□ 0.15
BNIP3-202ENST00000540159 C8orf76Q96K31 380 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms