RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 HOXA10P31260 410 aaPredicted RBP8.36□□□□□ -1.07
CDH19-203ENST00000540086 ZAP70P43403 619 aa8.36□□□□□ -1.07
CDH19-203ENST00000540086 KCNJ4P48050 445 aa8.36□□□□□ -1.07
CDH19-203ENST00000540086 NMIQ13287 307 aaPredicted RBP8.36□□□□□ -1.07
CDH19-203ENST00000540086 FAM227BQ96M60 508 aa8.36□□□□□ -1.07
CDH19-203ENST00000540086 USP26Q9BXU7 913 aa8.36□□□□□ -1.07
CDH19-203ENST00000540086 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
CDH19-203ENST00000540086 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
CDH19-203ENST00000540086 KLRK1P26718 216 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 ARID4AP29374 1257 aaPredicted RBP8.35□□□□□ -1.07
CDH19-203ENST00000540086 GYG1P46976 350 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 RBM25P49756 843 aaKnown RBP8.35□□□□□ -1.07
CDH19-203ENST00000540086 UBE4AQ14139 1066 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 KBTBD3Q8NAB2 608 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 ANKRD2Q9GZV1 360 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 HIP1O00291 1037 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 UQCRFS1P1P0C7P4 283 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 SRGNP10124 158 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 PDE6BP35913 854 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 RASGRF1Q13972 1273 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 SLFNL1Q499Z3 407 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 ZNF512BQ96KM6 892 aaPredicted RBP8.35□□□□□ -1.07
CDH19-203ENST00000540086 CRAMP1Q96RY5 1269 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 HMG20BQ9P0W2 317 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 ANKIB1Q9P2G1 1089 aa8.35□□□□□ -1.07
CDH19-203ENST00000540086 IQSEC3Q9UPP2 1182 aaPredicted RBP8.35□□□□□ -1.07
CDH19-203ENST00000540086 BBOX1O75936 387 aa8.34□□□□□ -1.07
CDH19-203ENST00000540086 NPR1P16066 1061 aa8.34□□□□□ -1.07
CDH19-203ENST00000540086 GPSM2P81274 684 aa8.34□□□□□ -1.07
CDH19-203ENST00000540086 RUFY2Q8WXA3 655 aa8.34□□□□□ -1.07
CDH19-203ENST00000540086 UPF1Q92900 1129 aaKnown RBP eCLIP8.34□□□□□ -1.07
CDH19-203ENST00000540086 PIH1D3Q9NQM4 214 aaKnown RBP8.34□□□□□ -1.07
CDH19-203ENST00000540086 ZNF804BA4D1E1 1349 aa8.34□□□□□ -1.07
CDH19-203ENST00000540086 PPEF1O14829 653 aaPredicted RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 CYP2E1P05181 493 aaPredicted RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 C2CD5Q86YS7 1000 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 SPATA5Q8NB90 893 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 ZNF622Q969S3 477 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH19-203ENST00000540086 FAM84BQ96KN1 310 aaPredicted RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 GPR101Q96P66 508 aaPredicted RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 IPO9Q96P70 1041 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 SEC62Q99442 399 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 LSG1Q9H089 658 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 RFX7Q2KHR2 1363 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 XDHP47989 1333 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 RNF113AO15541 343 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 ZBTB7AO95365 584 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 CHRNA5P30532 468 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 CAVIN4Q5BKX8 364 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 OLFM4Q6UX06 510 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 ZNF589Q86UQ0 364 aaPredicted RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 VPS37DQ86XT2 251 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 MASTLQ96GX5 879 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 KIF2CQ99661 725 aa8.33□□□□□ -1.08
CDH19-203ENST00000540086 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
CDH19-203ENST00000540086 RAD50Q92878 1312 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 TAF1P21675 1872 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
CDH19-203ENST00000540086 UFL1O94874 794 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 PTH1RQ03431 593 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 CCDC129Q6ZRS4 1044 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 DDRGK1Q96HY6 314 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 GNL3LQ9NVN8 582 aaKnown RBP8.32□□□□□ -1.08
CDH19-203ENST00000540086 SPEF2Q9C093 1822 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 IRS2Q9Y4H2 1338 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 NRXN2Q9P2S2 1712 aa8.32□□□□□ -1.08
CDH19-203ENST00000540086 H0YIN7 160 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 ALDH1B1P30837 517 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 HIBADHP31937 336 aaKnown RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 TTF1Q15361 905 aaPredicted RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 MCMDC2Q4G0Z9 681 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 ZMYM1Q5SVZ6 1142 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 FBXO33Q7Z6M2 555 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 GGA1Q9UJY5 639 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 PALD1Q9ULE6 856 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 LEMD3Q9Y2U8 911 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 CCDC171Q6TFL3 1326 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 FRAT2O75474 233 aaPredicted RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 MCCP23508 829 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 ATP2B4P23634 1241 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 TPRNQ4KMQ1 711 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 TMC4Q7Z404 712 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 SP8Q8IXZ3 490 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.31□□□□□ -1.08
CDH19-203ENST00000540086 ZNF219Q9P2Y4 722 aaPredicted RBP8.31□□□□□ -1.08
CDH19-203ENST00000540086 POLLQ9UGP5 575 aa8.31□□□□□ -1.08
CDH19-203ENST00000540086 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms