RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GFRA3O60609 400 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 TNFRSF21O75509 655 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 SELPP16109 830 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 ITPKAP23677 461 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 INPP5BP32019 993 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 LRRFIP1Q32MZ4 808 aaKnown RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 NAALADL2Q58DX5 795 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 TNNI3KQ59H18 835 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 INTS3Q68E01 1043 aaKnown RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 ANKLE2Q86XL3 938 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 C1orf127Q8N9H9 656 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 DHX38Q92620 1227 aaKnown RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 SMARCC1Q92922 1105 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 SALL4Q9UJQ4 1053 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 GDF2Q9UK05 429 aaPredicted RBP1.65□□□□□ -2.14
HIF1A-204ENST00000539097 ZNF232Q9UNY5 417 aa1.65□□□□□ -2.14
HIF1A-204ENST00000539097 FIGNL2A6NMB9 653 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 SIN3BO75182 1162 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 PAGE1O75459 146 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TARSP26639 723 aaKnown RBP1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TYRO3Q06418 890 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 FAPQ12884 760 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 C6orf118Q5T5N4 469 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NXPE4Q6UWF7 544 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NLRP13Q86W25 1043 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TRIM22Q8IYM9 498 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 FAM177A1Q8N128 213 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TNFRSF25Q93038 417 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 VTI1AQ96AJ9 217 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NLRP3Q96P20 1036 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 CABP1Q9NZU7 370 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 CYP8B1Q9UNU6 501 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TLR6Q9Y2C9 796 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 SNCAIPQ9Y6H5 919 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 CPNE3O75131 537 aaKnown RBP1.65□□□□□ -2.15
HIF1A-204ENST00000539097 WFS1O76024 890 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 ARAFP10398 606 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 GSTT1P30711 240 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 GJA8P48165 433 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NEUROD1Q13562 356 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NFE2L2Q16236 605 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.65□□□□□ -2.152e-7■□□□□ 8.5
HIF1A-204ENST00000539097 C8orf34Q49A92 452 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 ARSHQ5FYA8 562 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 TAF7LQ5H9L4 462 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 GJC2Q5T442 439 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-204ENST00000539097 LINC00528Q8N1L1 170 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 IFT43Q96FT9 208 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 RUBCNLQ9H714 662 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 C12orf49Q9H741 205 aa1.65□□□□□ -2.15
HIF1A-204ENST00000539097 PPP1R1BQ9UD71 204 aaPredicted RBP1.65□□□□□ -2.15
HIF1A-204ENST00000539097 NAT2P11245 290 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 CASP7P55210 303 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 LRRC69Q6ZNQ3 347 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 CRELD1Q96HD1 420 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 SUSD3Q96L08 255 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 GSX1Q9H4S2 264 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-204ENST00000539097 A0A087WZG4 1122 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 SOX9P48436 509 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 CDK8P49336 464 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 KRT85P78386 507 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 LMNB2Q03252 620 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 AP3B2Q13367 1082 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 AIDAQ96BJ3 306 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 ZFP42Q96MM3 310 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 EHMT1Q9H9B1 1298 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 ATXN7L1Q9ULK2 861 aaPredicted RBP1.64□□□□□ -2.15
HIF1A-204ENST00000539097 MEIS3P2A8K0S8 358 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 SHISA8B8ZZ34 492 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 ECEL1O95672 775 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 F11P03951 625 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 EIF4BP23588 611 aaKnown RBP1.64□□□□□ -2.15
HIF1A-204ENST00000539097 GRIA4P48058 902 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 IDH3AP50213 366 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 CCDC181Q5TID7 509 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 KRT25Q7Z3Z0 450 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 KIF18BQ86Y91 864 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 MCF2L2Q86YR7 1114 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 SLITRK4Q8IW52 837 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 FAM169BQ8N8A8 192 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 TMEM87AQ8NBN3 555 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 OR13H1Q8NG92 308 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 RNF34Q969K3 372 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 GPATCH3Q96I76 525 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 ZIC5Q96T25 663 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 NAGPAQ9UK23 515 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 SPEF1Q9Y4P9 236 aa1.64□□□□□ -2.15
HIF1A-204ENST00000539097 DCDC2BA2VCK2 349 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SLC35F4A4IF30 521 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 ZBTB42B2RXF5 422 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 GPR25O00155 361 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 MICAL2O94851 1124 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 FAAP100Q0VG06 881 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SFSWAPQ12872 951 aaKnown RBP1.63□□□□□ -2.15
HIF1A-204ENST00000539097 SCARF1Q14162 830 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 HGSNATQ68CP4 663 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 FOXR1Q6PIV2 292 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 BTLAQ7Z6A9 289 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 TMC1Q8TDI8 760 aa1.63□□□□□ -2.15
HIF1A-204ENST00000539097 STK35Q8TDR2 534 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms