RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TBC1D10BQ4KMP7 808 aaPredicted RBP10.6□□□□□ -0.71
GGA3-202ENST00000538886 EDC3Q96F86 508 aaKnown RBP10.6□□□□□ -0.71
GGA3-202ENST00000538886 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
GGA3-202ENST00000538886 PARP4Q9UKK3 1724 aaKnown RBP10.6□□□□□ -0.71
GGA3-202ENST00000538886 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
GGA3-202ENST00000538886 TCP10Q12799 353 aa10.6□□□□□ -0.71
GGA3-202ENST00000538886 BSDC1Q9NW68 430 aaPredicted RBP10.6□□□□□ -0.71
GGA3-202ENST00000538886 MYO1BO43795 1136 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 FOXO4P98177 505 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
GGA3-202ENST00000538886 TTF2Q9UNY4 1162 aaKnown RBP10.59□□□□□ -0.71
GGA3-202ENST00000538886 CLRN2A0PK11 232 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 DDNO94850 711 aaPredicted RBP10.59□□□□□ -0.71
GGA3-202ENST00000538886 PHKA1P46020 1223 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 OTUD7AQ8TE49 926 aaPredicted RBP10.59□□□□□ -0.71
GGA3-202ENST00000538886 LPIN2Q92539 896 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 GCC1Q96CN9 775 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 ATP6V0A2Q9Y487 856 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 USP5P45974 858 aa10.59□□□□□ -0.71
GGA3-202ENST00000538886 RRP12Q5JTH9 1297 aaKnown RBP10.59□□□□□ -0.71
GGA3-202ENST00000538886 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 PTGER2P43116 358 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 CIAPIN1Q6FI81 312 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 CENPQQ7L2Z9 268 aaPredicted RBP10.58□□□□□ -0.72
GGA3-202ENST00000538886 ABCA3Q99758 1704 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 RNF123Q5XPI4 1314 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 LDHBP07195 334 aaKnown RBP10.58□□□□□ -0.72
GGA3-202ENST00000538886 MX1P20591 662 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 KLRK1P26718 216 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 SF3B3Q15393 1217 aaKnown RBP10.58□□□□□ -0.72
GGA3-202ENST00000538886 TNNI3KQ59H18 835 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 CWC27Q6UX04 472 aaKnown RBP10.58□□□□□ -0.72
GGA3-202ENST00000538886 TBC1D16Q8TBP0 767 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 FPGT-TNNI3KV9GXZ4 949 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 MROH5Q6ZUA9 1318 aa10.58□□□□□ -0.72
GGA3-202ENST00000538886 ECE2O60344 883 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 IARSP41252 1262 aaKnown RBP10.57□□□□□ -0.72
GGA3-202ENST00000538886 MFAP1P55081 439 aaKnown RBP10.57□□□□□ -0.72
GGA3-202ENST00000538886 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 NOL8Q76FK4 1167 aaKnown RBP10.57□□□□□ -0.72
GGA3-202ENST00000538886 SP8Q8IXZ3 490 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 MINDY4BA8MYZ0 360 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 RAB11FIP3O75154 756 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 PDE4AP27815 886 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 STYK1Q6J9G0 422 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 AIDAQ96BJ3 306 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 LMNB1P20700 586 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 CYP7A1P22680 504 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 SLC9C2Q5TAH2 1124 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 LRP10Q7Z4F1 713 aa10.57□□□□□ -0.72
GGA3-202ENST00000538886 EAF2Q96CJ1 260 aaPredicted RBP10.57□□□□□ -0.72
GGA3-202ENST00000538886 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.57□□□□□ -0.722e-7■■■■□ 24.6
GGA3-202ENST00000538886 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
GGA3-202ENST00000538886 DLGAP5Q15398 846 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 CCDC102BQ68D86 513 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 CC2D2BQ6DHV5 1058 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 TXNRD3Q86VQ6 643 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 ECHDC1Q9NTX5 307 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 POLLQ9UGP5 575 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
GGA3-202ENST00000538886 NAA16Q6N069 864 aaPredicted RBP10.56□□□□□ -0.72
GGA3-202ENST00000538886 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
GGA3-202ENST00000538886 RRAGDQ9NQL2 400 aaPredicted RBP10.56□□□□□ -0.72
GGA3-202ENST00000538886 KCNQ5Q9NR82 932 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 MRC1P22897 1456 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 CACNB3P54284 484 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 CNTROBQ8N137 903 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 LEMD3Q9Y2U8 911 aa10.56□□□□□ -0.72
GGA3-202ENST00000538886 YBX3P16989 372 aaKnown RBP eCLIP10.55□□□□□ -0.724e-6■□□□□ 8.3
GGA3-202ENST00000538886 TNIP1Q15025 636 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 TRIM44Q96DX7 344 aaPredicted RBP10.55□□□□□ -0.72
GGA3-202ENST00000538886 GZF1Q9H116 711 aaPredicted RBP10.55□□□□□ -0.72
GGA3-202ENST00000538886 TCP10L2B9ZVM9 353 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 MPHOSPH10O00566 681 aaKnown RBP10.55□□□□□ -0.72
GGA3-202ENST00000538886 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
GGA3-202ENST00000538886 ZAP70P43403 619 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 PRAMEF18Q5VWM3 479 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 MAGEB6Q8N7X4 407 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 CDHR2Q9BYE9 1310 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 SASH1O94885 1247 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 TDO2P48775 406 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 DIXDC1Q155Q3 683 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 KAZALD1Q96I82 304 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 BRWD3Q6RI45 1802 aa10.55□□□□□ -0.72
GGA3-202ENST00000538886 L1TD1Q5T7N2 865 aaKnown RBP10.54□□□□□ -0.72
GGA3-202ENST00000538886 SAMD7Q7Z3H4 446 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 RRAGCQ9HB90 399 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 UQCRFS1P1P0C7P4 283 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 UBE4AQ14139 1066 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 SLC10A5Q5PT55 438 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 SSH3Q8TE77 659 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 CD209Q9NNX6 404 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 AATFQ9NY61 560 aaKnown RBP eCLIP10.54□□□□□ -0.72
GGA3-202ENST00000538886 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
GGA3-202ENST00000538886 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms