RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PRKAB1Q9Y478 270 aa12.36□□□□□ -0.43
CD9-207ENST00000538418 FBXO24O75426 580 aa12.35□□□□□ -0.43
CD9-207ENST00000538418 DTHD1Q6ZMT9 781 aa12.35□□□□□ -0.43
CD9-207ENST00000538418 CEP63Q96MT8 703 aa12.35□□□□□ -0.43
CD9-207ENST00000538418 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
CD9-207ENST00000538418 TMEM238LA0A1B0GVL6 79 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
CD9-207ENST00000538418 PF4P02776 101 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 LIG3P49916 1009 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 POU4F2Q12837 409 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 SNIP1Q8TAD8 396 aaKnown RBP12.34□□□□□ -0.43
CD9-207ENST00000538418 ABCB6Q9NP58 842 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 POLMQ9NP87 494 aaPredicted RBP12.34□□□□□ -0.43
CD9-207ENST00000538418 TLR6Q9Y2C9 796 aa12.34□□□□□ -0.43
CD9-207ENST00000538418 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 CDC45O75419 566 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
CD9-207ENST00000538418 APOBRQ0VD83 1088 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 SH3TC2Q8TF17 1288 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 NKD1Q969G9 470 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
CD9-207ENST00000538418 KANSL3Q9P2N6 904 aa12.33□□□□□ -0.44
CD9-207ENST00000538418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.33□□□□□ -0.44
CD9-207ENST00000538418 LMNB2Q03252 620 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 WDR44Q5JSH3 913 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 SNAP47Q5SQN1 464 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 GOLM1Q8NBJ4 401 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 SHDQ96IW2 340 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 TSEN34Q9BSV6 310 aaKnown RBP12.32□□□□□ -0.44
CD9-207ENST00000538418 CCDC113Q9H0I3 377 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 FANCLQ9NW38 375 aa12.32□□□□□ -0.44
CD9-207ENST00000538418 A0A1W2PNR3 127 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 SMAD7O15105 426 aaKnown RBP12.31□□□□□ -0.44
CD9-207ENST00000538418 SPINT1O43278 529 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 CAMK2GQ13555 558 aaPredicted RBP12.31□□□□□ -0.44
CD9-207ENST00000538418 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 MSRB2Q9Y3D2 182 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 TOPBP1Q92547 1522 aa12.31□□□□□ -0.44
CD9-207ENST00000538418 MSX1P28360 303 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 SPRYD7Q5W111 196 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 APPBP2Q92624 585 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 CEP44Q9C0F1 390 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 ZFYVE1Q9HBF4 777 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 SALL4Q9UJQ4 1053 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 GJA3Q9Y6H8 435 aa12.3□□□□□ -0.44
CD9-207ENST00000538418 A0A1B0GTH6 734 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 CELA3AP09093 270 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 CTSOP43234 321 aaPredicted RBP12.29□□□□□ -0.44
CD9-207ENST00000538418 FOXC1Q12948 553 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 GRIN2CQ14957 1233 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 CCDC81Q6ZN84 652 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 LILRB2Q8N423 598 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 TCF12Q99081 682 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
CD9-207ENST00000538418 ZNF608Q9ULD9 1512 aaPredicted RBP12.28□□□□□ -0.44
CD9-207ENST00000538418 PHF20L1A8MW92 1017 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 J3QL48 77 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 CRKP46108 304 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 PPME1Q9Y570 386 aa12.28□□□□□ -0.44
CD9-207ENST00000538418 ZNF697Q5TEC3 545 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 FAM196AQ6ZSG2 479 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 RPUSD2Q8IZ73 545 aaKnown RBP12.27□□□□□ -0.45
CD9-207ENST00000538418 CELF2-AS1Q8N7Q2 184 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 OR13H1Q8NG92 308 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 PKD2L1Q9P0L9 805 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 HCSTQ9UBK5 93 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 PPT2Q9UMR5 302 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 PRDM2Q13029 1718 aa12.27□□□□□ -0.45
CD9-207ENST00000538418 SASH3O75995 380 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 PARNO95453 639 aaKnown RBP12.26□□□□□ -0.45
CD9-207ENST00000538418 IFRD2Q12894 506 aaPredicted RBP12.26□□□□□ -0.45
CD9-207ENST00000538418 ARSHQ5FYA8 562 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 CCDC181Q5TID7 509 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 HOMER1Q86YM7 354 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 CCNJLQ8IV13 435 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 TIMMDC1Q9NPL8 285 aa12.26□□□□□ -0.45
CD9-207ENST00000538418 ESYT3A0FGR9 886 aa12.25□□□□□ -0.45
CD9-207ENST00000538418 TFE3P19532 575 aaPredicted RBP12.25□□□□□ -0.45
CD9-207ENST00000538418 TTBK2Q6IQ55 1244 aa12.25□□□□□ -0.45
CD9-207ENST00000538418 AGMOQ6ZNB7 445 aa12.25□□□□□ -0.45
CD9-207ENST00000538418 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
CD9-207ENST00000538418 DNMBPQ6XZF7 1577 aa12.25□□□□□ -0.45
CD9-207ENST00000538418 EIF6P56537 245 aaKnown RBP12.24□□□□□ -0.45
CD9-207ENST00000538418 DDR2Q16832 855 aa12.24□□□□□ -0.45
CD9-207ENST00000538418 SEZ6Q53EL9 994 aa12.24□□□□□ -0.45
CD9-207ENST00000538418 LYSMD3Q7Z3D4 306 aa12.24□□□□□ -0.45
CD9-207ENST00000538418 ZNF598Q86UK7 904 aaKnown RBP12.24□□□□□ -0.45
CD9-207ENST00000538418 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
CD9-207ENST00000538418 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
CD9-207ENST00000538418 ZCCHC2Q9C0B9 1178 aaKnown RBP12.24□□□□□ -0.45
CD9-207ENST00000538418 TTC24A2A3L6 582 aaPredicted RBP12.23□□□□□ -0.45
CD9-207ENST00000538418 MMP20O60882 483 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms