RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 KBTBD3Q8NAB2 608 aa11.04□□□□□ -0.64
DDB1-211ENST00000538280 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 AK7Q96M32 723 aa11.04□□□□□ -0.64
DDB1-211ENST00000538280 TEX13AQ9BXU3 409 aaPredicted RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 RBSNQ9H1K0 784 aa11.04□□□□□ -0.64
DDB1-211ENST00000538280 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
DDB1-211ENST00000538280 U3KPZ7 1027 aaPredicted RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 MYH14Q7Z406 1995 aaKnown RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 DDX60Q8IY21 1712 aaKnown RBP11.04□□□□□ -0.64
DDB1-211ENST00000538280 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
DDB1-211ENST00000538280 GJB2P29033 226 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
DDB1-211ENST00000538280 KRT32Q14532 448 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 USP48Q86UV5 1035 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 PDLIM2Q96JY6 352 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 ARAP2Q8WZ64 1704 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 CDHR2Q9BYE9 1310 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 ABCC12Q96J65 1359 aa11.03□□□□□ -0.64
DDB1-211ENST00000538280 ARFGEF1Q9Y6D6 1849 aa11.02□□□□□ -0.64
DDB1-211ENST00000538280 ZNF831Q5JPB2 1677 aa11.02□□□□□ -0.64
DDB1-211ENST00000538280 TCHHQ07283 1943 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
DDB1-211ENST00000538280 COL9A3Q14050 684 aaPredicted RBP11.02□□□□□ -0.65
DDB1-211ENST00000538280 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 SYAP1Q96A49 352 aaPredicted RBP11.02□□□□□ -0.65
DDB1-211ENST00000538280 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 HELLSQ9NRZ9 838 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 TMOD3Q9NYL9 352 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 ATP6V1DQ9Y5K8 247 aa11.02□□□□□ -0.65
DDB1-211ENST00000538280 MYH3P11055 1940 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 RIC1Q4ADV7 1423 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 GADD45BO75293 160 aaPredicted RBP11.01□□□□□ -0.65
DDB1-211ENST00000538280 CSF1RP07333 972 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 KCNJ4P48050 445 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 ZMYM1Q5SVZ6 1142 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
DDB1-211ENST00000538280 DSCC1Q9BVC3 393 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
DDB1-211ENST00000538280 NUP98P52948 1817 aa11□□□□□ -0.65
DDB1-211ENST00000538280 MYH7P12883 1935 aa11□□□□□ -0.65
DDB1-211ENST00000538280 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
DDB1-211ENST00000538280 SYCE3A1L190 88 aa11□□□□□ -0.65
DDB1-211ENST00000538280 ESPNB1AK53 854 aa11□□□□□ -0.65
DDB1-211ENST00000538280 SIK1P57059 783 aa11□□□□□ -0.65
DDB1-211ENST00000538280 LRRC24Q50LG9 513 aa11□□□□□ -0.65
DDB1-211ENST00000538280 DNAJC10Q8IXB1 793 aa11□□□□□ -0.65
DDB1-211ENST00000538280 FLAD1Q8NFF5 587 aa11□□□□□ -0.65
DDB1-211ENST00000538280 PAG1Q9NWQ8 432 aa11□□□□□ -0.65
DDB1-211ENST00000538280 CNPY2Q9Y2B0 182 aa11□□□□□ -0.65
DDB1-211ENST00000538280 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
DDB1-211ENST00000538280 MYH15Q9Y2K3 1946 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 LAMB2P55268 1798 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 A0A1B0GUL7 405 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 GNPATO15228 680 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 CYP21A2P08686 494 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 UBE2HP62256 183 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
DDB1-211ENST00000538280 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
DDB1-211ENST00000538280 NECAB1Q8N987 351 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 NEK1Q96PY6 1258 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 SLC4A9Q96Q91 983 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
DDB1-211ENST00000538280 DNAJC2Q99543 621 aaKnown RBP10.99□□□□□ -0.65
DDB1-211ENST00000538280 AGXT2Q9BYV1 514 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 SBF1O95248 1867 aa10.99□□□□□ -0.65
DDB1-211ENST00000538280 CHGBP05060 677 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 MMP10P09238 476 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 PDCP20941 246 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 CCDC183Q5T5S1 534 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 KIF6Q6ZMV9 814 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 CCDC129Q6ZRS4 1044 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 STOX1Q6ZVD7 989 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
DDB1-211ENST00000538280 SMARCC1Q92922 1105 aaPredicted RBP10.98□□□□□ -0.65
DDB1-211ENST00000538280 GTF3C6Q969F1 213 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 ZNF594Q96JF6 807 aaPredicted RBP10.98□□□□□ -0.65
DDB1-211ENST00000538280 PUS3Q9BZE2 481 aaKnown RBP10.98□□□□□ -0.65
DDB1-211ENST00000538280 TSPY26PQ9H489 355 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 CHMP3Q9Y3E7 222 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 MAST3O60307 1309 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 ELP1O95163 1332 aa10.98□□□□□ -0.65
DDB1-211ENST00000538280 AKAP11Q9UKA4 1901 aa10.97□□□□□ -0.65
DDB1-211ENST00000538280 GOLIM4O00461 696 aa10.97□□□□□ -0.65
DDB1-211ENST00000538280 RNF113AO15541 343 aaKnown RBP10.97□□□□□ -0.65
DDB1-211ENST00000538280 LETM1O95202 739 aaPredicted RBP10.97□□□□□ -0.65
DDB1-211ENST00000538280 STARD3NLO95772 234 aa10.97□□□□□ -0.65
DDB1-211ENST00000538280 HMGB1P09429 215 aaKnown RBP10.97□□□□□ -0.65
DDB1-211ENST00000538280 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
DDB1-211ENST00000538280 CYP19A1P11511 503 aaPredicted RBP10.97□□□□□ -0.65
DDB1-211ENST00000538280 TIMM10P62072 90 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms