RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FLIIQ13045 1269 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 STK3Q13188 491 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 HSP90AB3PQ58FF7 597 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 TTC41PQ6P2S7 1318 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 KIRREL3Q8IZU9 778 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 VWDEQ8N2E2 1590 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 CD248Q9HCU0 757 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 KIAA1210Q9ULL0 1709 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 MYO3AQ8NEV4 1616 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 A0A0U1RQJ8 604 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 MAP2K1Q02750 393 aaPredicted RBP12.36□□□□□ -0.43
RTN3-208ENST00000537981 ATRIPQ8WXE1 791 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 PUF60Q9UHX1 559 aaKnown RBP12.36□□□□□ -0.43
RTN3-208ENST00000537981 TAF6LQ9Y6J9 622 aa12.36□□□□□ -0.43
RTN3-208ENST00000537981 TRPM2O94759 1503 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
RTN3-208ENST00000537981 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 STX1AQ16623 288 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
RTN3-208ENST00000537981 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 ARIH1Q9Y4X5 557 aaPredicted RBP12.35□□□□□ -0.43
RTN3-208ENST00000537981 MRFAP1Q9Y605 127 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
RTN3-208ENST00000537981 ATP1A3P13637 1013 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 MAP3K9P80192 1104 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 DPCR1Q3MIW9 517 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 PRPF40BQ6NWY9 871 aaKnown RBP12.35□□□□□ -0.43
RTN3-208ENST00000537981 DPF2Q92785 391 aa12.35□□□□□ -0.43
RTN3-208ENST00000537981 PTPRMP28827 1452 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 MYO1FO00160 1098 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 SGSM2O43147 1006 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 GSDMDP57764 484 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 SCRN1Q12765 414 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
RTN3-208ENST00000537981 G2E3Q7L622 706 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 RIMS1Q86UR5 1692 aaKnown RBP12.34□□□□□ -0.43
RTN3-208ENST00000537981 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 LRRIQ3A6PVS8 624 aaPredicted RBP12.34□□□□□ -0.43
RTN3-208ENST00000537981 JAK2O60674 1132 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 GNG11P61952 73 aa12.34□□□□□ -0.43
RTN3-208ENST00000537981 BIN1O00499 593 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 MARCH6O60337 910 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 NEBLO76041 1014 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 CCT5P48643 541 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 NFE2L2Q16236 605 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 KIFC2Q96AC6 838 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 MIEF2Q96C03 454 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 BORCS6Q96GS4 357 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
RTN3-208ENST00000537981 CDK12Q9NYV4 1490 aaPredicted RBP12.33□□□□□ -0.44
RTN3-208ENST00000537981 ADAMTSL3P82987 1691 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 PPP1R12AO14974 1030 aaPredicted RBP12.33□□□□□ -0.44
RTN3-208ENST00000537981 SKAP2O75563 359 aaPredicted RBP12.33□□□□□ -0.44
RTN3-208ENST00000537981 TXLNAP40222 546 aa12.33□□□□□ -0.44
RTN3-208ENST00000537981 SCAND2PQ9GZW5 306 aaPredicted RBP12.33□□□□□ -0.44
RTN3-208ENST00000537981 CCDC151A5D8V7 595 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 TMEM232C9JQI7 657 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 FYB1O15117 783 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 RHOXF2BP0C7M4 288 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 KARSQ15046 597 aaKnown RBP12.32□□□□□ -0.44
RTN3-208ENST00000537981 ZRSR1Q15695 479 aaKnown RBP12.32□□□□□ -0.44
RTN3-208ENST00000537981 ANKRD13AQ8IZ07 590 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 RHOXF2Q9BQY4 288 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 DESI2Q9BSY9 194 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 AGLP35573 1532 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 LMOD1P29536 600 aaPredicted RBP12.32□□□□□ -0.44
RTN3-208ENST00000537981 VSNL1P62760 191 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 OS9Q13438 667 aaPredicted RBP12.32□□□□□ -0.44
RTN3-208ENST00000537981 TOGARAM2Q6ZUX3 1019 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 CCAR1Q8IX12 1150 aaKnown RBP12.32□□□□□ -0.44
RTN3-208ENST00000537981 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
RTN3-208ENST00000537981 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 MROH2AA6NES4 1674 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 CCDC150Q8NCX0 1101 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 N4BP2L2Q92802 583 aaPredicted RBP12.31□□□□□ -0.44
RTN3-208ENST00000537981 CCDC97Q96F63 343 aaPredicted RBP12.31□□□□□ -0.44
RTN3-208ENST00000537981 GDAP1L1Q96MZ0 367 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 FAM169AQ9Y6X4 670 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 EME2A4GXA9 379 aaPredicted RBP12.31□□□□□ -0.44
RTN3-208ENST00000537981 TPM1P09493 284 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 HSPA2P54652 639 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 CASP8Q14790 479 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 NUTM2DQ5VT03 806 aaPredicted RBP12.31□□□□□ -0.44
RTN3-208ENST00000537981 GOLGA1Q92805 767 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 PPP2R2CQ9Y2T4 447 aa12.31□□□□□ -0.44
RTN3-208ENST00000537981 FER1L4A9Z1Z3 1794 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 RNF40O75150 1001 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 GPTP24298 496 aa12.3□□□□□ -0.44
RTN3-208ENST00000537981 HSP90AA4PQ58FG1 418 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms