RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NCOA5Q9HCD5 579 aaKnown RBP16.84■□□□□ 0.29
USP44-203ENST00000537435 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
USP44-203ENST00000537435 M0R2C6 588 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 PPFIA3O75145 1194 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 TDRD7Q8NHU6 1098 aaKnown RBP16.84■□□□□ 0.29
USP44-203ENST00000537435 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 KIF3AQ9Y496 699 aa16.84■□□□□ 0.29
USP44-203ENST00000537435 TTLL5Q6EMB2 1281 aa16.83■□□□□ 0.28
USP44-203ENST00000537435 RCOR1Q9UKL0 485 aa16.83■□□□□ 0.28
USP44-203ENST00000537435 WDR17Q8IZU2 1322 aa16.83■□□□□ 0.28
USP44-203ENST00000537435 PDIA3P30101 505 aaKnown RBP16.82■□□□□ 0.28
USP44-203ENST00000537435 FKBP4Q02790 459 aaKnown RBP eCLIP16.82■□□□□ 0.28
USP44-203ENST00000537435 OSBP2Q969R2 916 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 TRIM5Q9C035 493 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 CEP126Q9P2H0 1117 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 TJP1Q07157 1748 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 SALL1Q9NSC2 1324 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 KCPQ6ZWJ8 1503 aa16.82■□□□□ 0.28
USP44-203ENST00000537435 ZNF75DP51815 510 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 GUCY1B3Q02153 619 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 NUP188Q5SRE5 1749 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 CCDC186Q7Z3E2 898 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 PLA2G4DQ86XP0 818 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 CCAR1Q8IX12 1150 aaKnown RBP16.81■□□□□ 0.28
USP44-203ENST00000537435 DRC7Q8IY82 874 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP44-203ENST00000537435 ZNF274Q96GC6 653 aaPredicted RBP16.81■□□□□ 0.28
USP44-203ENST00000537435 LAMA4Q16363 1823 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
USP44-203ENST00000537435 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
USP44-203ENST00000537435 CCDC158Q5M9N0 1113 aa16.8■□□□□ 0.28
USP44-203ENST00000537435 TTC39AQ5SRH9 613 aa16.8■□□□□ 0.28
USP44-203ENST00000537435 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
USP44-203ENST00000537435 ISCA1Q9BUE6 129 aa16.8■□□□□ 0.28
USP44-203ENST00000537435 GOLPH3LQ9H4A5 285 aa16.8■□□□□ 0.28
USP44-203ENST00000537435 ADORA1P30542 326 aa16.8■□□□□ 0.28
USP44-203ENST00000537435 ZNF396Q96N95 335 aaPredicted RBP16.8■□□□□ 0.28
USP44-203ENST00000537435 GTF2F1P35269 517 aaKnown RBP eCLIP16.79■□□□□ 0.28
USP44-203ENST00000537435 GORABQ5T7V8 394 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.79■□□□□ 0.28
USP44-203ENST00000537435 TSC1Q92574 1164 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 XAGE2Q96GT9 111 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 NRBP1Q9UHY1 535 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 ZNF330Q9Y3S2 320 aaPredicted RBP16.79■□□□□ 0.28
USP44-203ENST00000537435 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 CAVIN2O95810 425 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 VSIG10Q8N0Z9 540 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 CCDC85AQ96PX6 553 aaPredicted RBP16.79■□□□□ 0.28
USP44-203ENST00000537435 CARMIL3Q8ND23 1372 aa16.79■□□□□ 0.28
USP44-203ENST00000537435 CTAGE5O15320 804 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 IL2RBP14784 551 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 HAND2P61296 217 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
USP44-203ENST00000537435 ATL3Q6DD88 541 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 ILDR1Q86SU0 546 aaPredicted RBP16.78■□□□□ 0.28
USP44-203ENST00000537435 GPHNQ9NQX3 736 aaPredicted RBP16.78■□□□□ 0.28
USP44-203ENST00000537435 AKAP2Q9Y2D5 859 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 UBR2Q8IWV8 1755 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 FOXP2O15409 715 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 LRMPQ12912 555 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 SNW1Q13573 536 aaKnown RBP16.78■□□□□ 0.28
USP44-203ENST00000537435 C11orf57Q6ZUT1 292 aaPredicted RBP16.78■□□□□ 0.28
USP44-203ENST00000537435 CTNNA3Q9UI47 895 aa16.78■□□□□ 0.28
USP44-203ENST00000537435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.77■□□□□ 0.28
USP44-203ENST00000537435 FDPSP14324 419 aaKnown RBP16.77■□□□□ 0.28
USP44-203ENST00000537435 IQCB1Q15051 598 aa16.77■□□□□ 0.28
USP44-203ENST00000537435 FBXL16Q8N461 479 aa16.77■□□□□ 0.28
USP44-203ENST00000537435 CHMP4CQ96CF2 233 aa16.77■□□□□ 0.28
USP44-203ENST00000537435 TNS2Q63HR2 1409 aa16.77■□□□□ 0.27
USP44-203ENST00000537435 SCARF1Q14162 830 aa16.77■□□□□ 0.27
USP44-203ENST00000537435 STX1AQ16623 288 aa16.77■□□□□ 0.27
USP44-203ENST00000537435 IMMTQ16891 758 aaKnown RBP16.77■□□□□ 0.27
USP44-203ENST00000537435 BRINP3Q76B58 766 aa16.77■□□□□ 0.27
USP44-203ENST00000537435 SPEF2Q9C093 1822 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 GOLGA6L19H0YKK7 550 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 ZFYP08048 801 aaPredicted RBP16.76■□□□□ 0.27
USP44-203ENST00000537435 ME1P48163 572 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 EVCP57679 992 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 TAF7LQ5H9L4 462 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 FSIP1Q8NA03 581 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 ENGASEQ8NFI3 743 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 FAM89AQ96GI7 184 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 KINO60870 393 aaKnown RBP16.76■□□□□ 0.27
USP44-203ENST00000537435 FGAP02671 866 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 ZAP70P43403 619 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 FAM160A1Q05DH4 1040 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
USP44-203ENST00000537435 HSP90AB3PQ58FF7 597 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 ZSCAN25Q6NSZ9 544 aa16.76■□□□□ 0.27
USP44-203ENST00000537435 COL5A2P05997 1499 aaPredicted RBP16.76■□□□□ 0.27
USP44-203ENST00000537435 ARID3AQ99856 593 aa16.75■□□□□ 0.27
USP44-203ENST00000537435 PUS7LQ9H0K6 701 aaKnown RBP16.75■□□□□ 0.27
USP44-203ENST00000537435 OTUD7BQ6GQQ9 843 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms