RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CUEDC1Q9NWM3 386 aaPredicted RBP9.62□□□□□ -0.87
YBX3-206ENST00000536823 PKD1L3Q7Z443 1732 aa9.62□□□□□ -0.87
YBX3-206ENST00000536823 TATP17735 454 aaPredicted RBP9.61□□□□□ -0.87
YBX3-206ENST00000536823 TNNT2P45379 298 aaPredicted RBP9.61□□□□□ -0.87
YBX3-206ENST00000536823 DHX9Q08211 1270 aaKnown RBP9.61□□□□□ -0.87
YBX3-206ENST00000536823 KNSTRNQ9Y448 316 aa9.61□□□□□ -0.87
YBX3-206ENST00000536823 TXNRD1Q16881 649 aa9.6□□□□□ -0.87
YBX3-206ENST00000536823 CSPP1Q1MSJ5 1256 aa9.6□□□□□ -0.87
YBX3-206ENST00000536823 PARP9Q8IXQ6 854 aa9.6□□□□□ -0.87
YBX3-206ENST00000536823 ZNF395Q9H8N7 513 aaPredicted RBP9.6□□□□□ -0.87
YBX3-206ENST00000536823 PAPPAQ13219 1627 aa9.6□□□□□ -0.87
YBX3-206ENST00000536823 PCDH11XQ9BZA7 1347 aa9.59□□□□□ -0.87
YBX3-206ENST00000536823 PCDH11YQ9BZA8 1340 aa9.59□□□□□ -0.87
YBX3-206ENST00000536823 EIF4A2Q14240 407 aaKnown RBP9.59□□□□□ -0.87
YBX3-206ENST00000536823 MORC1Q86VD1 984 aa9.59□□□□□ -0.87
YBX3-206ENST00000536823 KCTD15Q96SI1 283 aaPredicted RBP9.59□□□□□ -0.87
YBX3-206ENST00000536823 CASZ1Q86V15 1759 aa9.59□□□□□ -0.87
YBX3-206ENST00000536823 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
YBX3-206ENST00000536823 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
YBX3-206ENST00000536823 RIC3Q7Z5B4 369 aa9.58□□□□□ -0.88
YBX3-206ENST00000536823 GPKOWQ92917 476 aaPredicted RBP eCLIP9.58□□□□□ -0.88
YBX3-206ENST00000536823 IGSF1Q8N6C5 1336 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 TOGARAM1Q9Y4F4 1720 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 CYP27B1O15528 508 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 FURINP09958 794 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 ZNF837Q96EG3 531 aaPredicted RBP9.57□□□□□ -0.88
YBX3-206ENST00000536823 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 CDV3Q9UKY7 258 aaKnown RBP9.57□□□□□ -0.88
YBX3-206ENST00000536823 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
YBX3-206ENST00000536823 GPR25O00155 361 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 FOXR1Q6PIV2 292 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 LYSMD3Q7Z3D4 306 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 SYTL4Q96C24 671 aaPredicted RBP9.56□□□□□ -0.88
YBX3-206ENST00000536823 STK32BQ9NY57 414 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 SPG7Q9UQ90 795 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 GTF3C3Q9Y5Q9 886 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 LY75O60449 1722 aa9.56□□□□□ -0.88
YBX3-206ENST00000536823 SLC15A2Q16348 729 aa9.55□□□□□ -0.88
YBX3-206ENST00000536823 SLC27A3Q5K4L6 730 aa9.55□□□□□ -0.88
YBX3-206ENST00000536823 ACDQ96AP0 544 aa9.55□□□□□ -0.88
YBX3-206ENST00000536823 LRRC4BQ9NT99 713 aa9.55□□□□□ -0.88
YBX3-206ENST00000536823 ITGB4P16144 1822 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 KRBA1A5PL33 1030 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 INTS6LQ5JSJ4 861 aaKnown RBP9.54□□□□□ -0.88
YBX3-206ENST00000536823 KRTAP1-3Q8IUG1 177 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 DDRGK1Q96HY6 314 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
YBX3-206ENST00000536823 QSER1Q2KHR3 1735 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 KDRP35968 1356 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 TRIM22Q8IYM9 498 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 FAM117AQ9C073 453 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 TUBGCP6Q96RT7 1819 aa9.53□□□□□ -0.88
YBX3-206ENST00000536823 PHKG2P15735 406 aa9.52□□□□□ -0.89
YBX3-206ENST00000536823 IL13P35225 146 aa9.52□□□□□ -0.89
YBX3-206ENST00000536823 CC2D1BQ5T0F9 858 aaKnown RBP9.52□□□□□ -0.89
YBX3-206ENST00000536823 AEBP1Q8IUX7 1158 aa9.52□□□□□ -0.89
YBX3-206ENST00000536823 IL27Q8NEV9 243 aa9.52□□□□□ -0.89
YBX3-206ENST00000536823 HELBQ8NG08 1087 aaPredicted RBP9.52□□□□□ -0.89
YBX3-206ENST00000536823 PDGFDQ9GZP0 370 aaPredicted RBP9.52□□□□□ -0.89
YBX3-206ENST00000536823 PALLDQ8WX93 1383 aa9.51□□□□□ -0.89
YBX3-206ENST00000536823 ADH1AP07327 375 aa9.51□□□□□ -0.89
YBX3-206ENST00000536823 MTHFSP49914 203 aa9.51□□□□□ -0.89
YBX3-206ENST00000536823 IFNL2Q8IZJ0 200 aa9.51□□□□□ -0.89
YBX3-206ENST00000536823 CCNL1Q9UK58 526 aaPredicted RBP9.51□□□□□ -0.89
YBX3-206ENST00000536823 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
YBX3-206ENST00000536823 TAF1LQ8IZX4 1826 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 ZBTB7AO95365 584 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 RHOQP17081 205 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 KCNQ4P56696 695 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 QPCTQ16769 361 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
YBX3-206ENST00000536823 ZNF530Q6P9A1 599 aaPredicted RBP9.5□□□□□ -0.89
YBX3-206ENST00000536823 MPRIPQ6WCQ1 1025 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 PIGBQ92521 554 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 SMARCC1Q92922 1105 aaPredicted RBP9.5□□□□□ -0.89
YBX3-206ENST00000536823 C5P01031 1676 aa9.5□□□□□ -0.89
YBX3-206ENST00000536823 KDM6AO15550 1401 aaPredicted RBP9.49□□□□□ -0.89
YBX3-206ENST00000536823 HSP90AB1P08238 724 aaKnown RBP9.49□□□□□ -0.89
YBX3-206ENST00000536823 AMOTQ4VCS5 1084 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 SULT6B1Q6IMI4 303 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 PDXDC2PQ6P474 469 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 RIPOR1Q6ZS17 1223 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 PRICKLE2Q7Z3G6 844 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 MTFR1LQ9H019 292 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 TMOD3Q9NYL9 352 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 PPP1R1BQ9UD71 204 aaPredicted RBP9.49□□□□□ -0.89
YBX3-206ENST00000536823 PNPLA7Q6ZV29 1317 aa9.49□□□□□ -0.89
YBX3-206ENST00000536823 OIP5O43482 229 aa9.48□□□□□ -0.89
YBX3-206ENST00000536823 PTGIRP43119 386 aa9.48□□□□□ -0.89
YBX3-206ENST00000536823 SNRPNP63162 240 aaKnown RBP9.48□□□□□ -0.89
YBX3-206ENST00000536823 DBN1Q16643 649 aa9.48□□□□□ -0.89
YBX3-206ENST00000536823 ALYREFQ86V81 257 aaKnown RBP9.48□□□□□ -0.89
YBX3-206ENST00000536823 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
YBX3-206ENST00000536823 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
YBX3-206ENST00000536823 COL24A1Q17RW2 1714 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms