RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SLC5A1P13866 664 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 ZNF771Q7L3S4 317 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-207ENST00000536513 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 CDC5LQ99459 802 aaKnown RBP9.76□□□□□ -0.85
ABCA4-207ENST00000536513 ISCA1Q9BUE6 129 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 TAF6LQ9Y6J9 622 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 COL15A1P39059 1388 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 CHRNDQ07001 517 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 RABEP1Q15276 862 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 SKOR2Q2VWA4 1001 aaPredicted RBP9.76□□□□□ -0.85
ABCA4-207ENST00000536513 ZKSCAN3Q9BRR0 538 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 TDO2P48775 406 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 RBM5P52756 815 aaKnown RBP eCLIP9.76□□□□□ -0.85
ABCA4-207ENST00000536513 NFXL1Q6ZNB6 911 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 ATG9AQ7Z3C6 839 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 LRP10Q7Z4F1 713 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 INCENPQ9NQS7 918 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 PDRG1Q9NUG6 133 aa9.76□□□□□ -0.85
ABCA4-207ENST00000536513 BCL9O00512 1426 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 PRDM1O75626 825 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 BLOC1S2Q6QNY1 142 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 CYP46A1Q9Y6A2 500 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 ATP2B1P20020 1258 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 CAVIN4Q5BKX8 364 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 RNF20Q5VTR2 975 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 RALYLQ86SE5 291 aaKnown RBP9.75□□□□□ -0.85
ABCA4-207ENST00000536513 RGS22Q8NE09 1264 aa9.75□□□□□ -0.85
ABCA4-207ENST00000536513 NFIXQ14938 502 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 BARGINQ6ZT62 677 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 FNBP4Q8N3X1 1017 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-207ENST00000536513 ATF5Q9Y2D1 282 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-207ENST00000536513 SGSM2O43147 1006 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 KLRK1P26718 216 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 ARMT1Q9H993 441 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 SMC3Q9UQE7 1217 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
ABCA4-207ENST00000536513 RPS8P62241 208 aaKnown RBP9.74□□□□□ -0.85
ABCA4-207ENST00000536513 COL9A3Q14050 684 aaPredicted RBP9.74□□□□□ -0.85
ABCA4-207ENST00000536513 CAVIN1Q6NZI2 390 aaKnown RBP9.74□□□□□ -0.85
ABCA4-207ENST00000536513 PDE8BO95263 885 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 CYP7A1P22680 504 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 RFX5P48382 616 aaPredicted RBP9.73□□□□□ -0.85
ABCA4-207ENST00000536513 ZSCAN30Q86W11 494 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 BRF1Q92994 677 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 TMX3Q96JJ7 454 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 PSMD1Q99460 953 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 SERPINB2P05120 415 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 MMP10P09238 476 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 TRDNQ13061 729 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 DOK7Q18PE1 504 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 NUP133Q8WUM0 1156 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 PDGFDQ9GZP0 370 aaPredicted RBP9.73□□□□□ -0.85
ABCA4-207ENST00000536513 RPS6KA4O75676 772 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 ZBTB7AO95365 584 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 PTMSP20962 102 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 AK2P54819 239 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 ATP2B2Q01814 1243 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 SDR42E1Q8WUS8 393 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 ERBB4Q15303 1308 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 TTC41PQ6P2S7 1318 aa9.73□□□□□ -0.85
ABCA4-207ENST00000536513 FIBPO43427 364 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 UFL1O94874 794 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 MCAMP43121 646 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 RBM6P78332 1123 aaKnown RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 CCDC173Q0VFZ6 552 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 EZH2Q15910 746 aaKnown RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 CREB3L3Q68CJ9 461 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 FAM173BQ6P4H8 233 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 FAM184AQ8NB25 1140 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 GPHNQ9NQX3 736 aaPredicted RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PSDA5PKW4 1024 aaPredicted RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 CBX1P83916 185 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 MCMDC2Q4G0Z9 681 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PARP10Q53GL7 1025 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PUS7LQ9H0K6 701 aaKnown RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 SNX14Q9Y5W7 946 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PHLPP1O60346 1717 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PRKAB2O43741 272 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 PRPF40AO75400 957 aaKnown RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 MBD4O95243 580 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 ST5P78524 1137 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 NCOA5Q9HCD5 579 aaKnown RBP9.72□□□□□ -0.85
ABCA4-207ENST00000536513 CCDC171Q6TFL3 1326 aa9.72□□□□□ -0.85
ABCA4-207ENST00000536513 TRPM3Q9HCF6 1732 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 H3BQV1 296 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 GNL2Q13823 731 aaKnown RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 PUM3Q15397 648 aaKnown RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 IFFO2Q5TF58 517 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 ZNF772Q68DY9 489 aaPredicted RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 POTEAQ6S8J7 498 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 DZIP1Q86YF9 867 aaKnown RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 MYL10Q9BUA6 226 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 NAPBQ9H115 298 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 GNL3LQ9NVN8 582 aaKnown RBP9.71□□□□□ -0.85
ABCA4-207ENST00000536513 ZNF532Q9HCE3 1301 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 CPLX1O14810 134 aa9.71□□□□□ -0.85
ABCA4-207ENST00000536513 MAP3K12Q12852 859 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms