RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 UBE4AQ14139 1066 aa24.6■■□□□ 1.53
TNFRSF1A-205ENST00000534885 RUFY2Q8WXA3 655 aa24.6■■□□□ 1.53
TNFRSF1A-205ENST00000534885 RFX7Q2KHR2 1363 aa24.59■■□□□ 1.53
TNFRSF1A-205ENST00000534885 BCAMP50895 628 aa24.59■■□□□ 1.53
TNFRSF1A-205ENST00000534885 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
TNFRSF1A-205ENST00000534885 KIF2CQ99661 725 aa24.59■■□□□ 1.53
TNFRSF1A-205ENST00000534885 HOXA10P31260 410 aaPredicted RBP24.58■■□□□ 1.53
TNFRSF1A-205ENST00000534885 ANKRD2Q9GZV1 360 aa24.58■■□□□ 1.53
TNFRSF1A-205ENST00000534885 COL11A2P13942 1736 aaPredicted RBP24.57■■□□□ 1.52
TNFRSF1A-205ENST00000534885 UQCRFS1P1P0C7P4 283 aa24.57■■□□□ 1.52
TNFRSF1A-205ENST00000534885 DDRGK1Q96HY6 314 aa24.57■■□□□ 1.52
TNFRSF1A-205ENST00000534885 MYO5AQ9Y4I1 1855 aaKnown RBP24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 KLRK1P26718 216 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 GYG1P46976 350 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 RASGRF1Q13972 1273 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 SLFNL1Q499Z3 407 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 CRAMP1Q96RY5 1269 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 HMG20BQ9P0W2 317 aa24.56■■□□□ 1.52
TNFRSF1A-205ENST00000534885 SRGNP10124 158 aa24.55■■□□□ 1.52
TNFRSF1A-205ENST00000534885 KCNJ4P48050 445 aa24.55■■□□□ 1.52
TNFRSF1A-205ENST00000534885 LSG1Q9H089 658 aaKnown RBP24.55■■□□□ 1.52
TNFRSF1A-205ENST00000534885 CYP2E1P05181 493 aaPredicted RBP24.55■■□□□ 1.52
TNFRSF1A-205ENST00000534885 MED23Q9ULK4 1368 aa24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 RAD50Q92878 1312 aa24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 PDE6BP35913 854 aa24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 ZNF589Q86UQ0 364 aaPredicted RBP24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 SEC62Q99442 399 aaKnown RBP24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 ANKIB1Q9P2G1 1089 aa24.54■■□□□ 1.52
TNFRSF1A-205ENST00000534885 MYH7P12883 1935 aa24.53■■□□□ 1.52
TNFRSF1A-205ENST00000534885 ZNF804BA4D1E1 1349 aa24.53■■□□□ 1.52
TNFRSF1A-205ENST00000534885 KIAA1211Q6ZU35 1233 aa24.53■■□□□ 1.52
TNFRSF1A-205ENST00000534885 SPATA5Q8NB90 893 aa24.53■■□□□ 1.52
TNFRSF1A-205ENST00000534885 BBOX1O75936 387 aa24.52■■□□□ 1.52
TNFRSF1A-205ENST00000534885 PTH1RQ03431 593 aa24.52■■□□□ 1.52
TNFRSF1A-205ENST00000534885 FAM84BQ96KN1 310 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-205ENST00000534885 IQSEC3Q9UPP2 1182 aaPredicted RBP24.52■■□□□ 1.52
TNFRSF1A-205ENST00000534885 PIH1D3Q9NQM4 214 aaKnown RBP24.52■■□□□ 1.52
TNFRSF1A-205ENST00000534885 XDHP47989 1333 aa24.51■■□□□ 1.51
TNFRSF1A-205ENST00000534885 NPR1P16066 1061 aa24.51■■□□□ 1.51
TNFRSF1A-205ENST00000534885 CAVIN4Q5BKX8 364 aa24.51■■□□□ 1.51
TNFRSF1A-205ENST00000534885 EPB41L2O43491 1005 aaKnown RBP24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 TICAM2Q86XR7 235 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 LRRC37AA6NMS7 1700 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 RNF113AO15541 343 aaKnown RBP24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 SLC4A3P48751 1232 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 GPSM2P81274 684 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 CCDC129Q6ZRS4 1044 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 TXNRD3Q86VQ6 643 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 PALD1Q9ULE6 856 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 IRS2Q9Y4H2 1338 aa24.5■■□□□ 1.51
TNFRSF1A-205ENST00000534885 TTF1Q15361 905 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 ZMYM1Q5SVZ6 1142 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 VPS37DQ86XT2 251 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 NSFL1CQ9UNZ2 370 aaKnown RBP24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 CACNA1SQ13698 1873 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 PPEF1O14829 653 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 MCMDC2Q4G0Z9 681 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 FBXO33Q7Z6M2 555 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 LEMD3Q9Y2U8 911 aa24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 COL1A1P02452 1464 aaPredicted RBP24.49■■□□□ 1.51
TNFRSF1A-205ENST00000534885 DOCK2Q92608 1830 aa24.48■■□□□ 1.51
TNFRSF1A-205ENST00000534885 MCCP23508 829 aa24.48■■□□□ 1.51
TNFRSF1A-205ENST00000534885 MASTLQ96GX5 879 aa24.48■■□□□ 1.51
TNFRSF1A-205ENST00000534885 GOLGB1Q14789 3259 aaKnown RBP24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 IDH1O75874 414 aaKnown RBP24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 HSPA4P34932 840 aa24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 GNL3LQ9NVN8 582 aaKnown RBP24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 C2CD5Q86YS7 1000 aa24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 SLC16A10Q8TF71 515 aa24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 GPR101Q96P66 508 aaPredicted RBP24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 HELLSQ9NRZ9 838 aa24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 MYH13Q9UKX3 1938 aa24.47■■□□□ 1.51
TNFRSF1A-205ENST00000534885 LRRFIP1Q32MZ4 808 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 UPF1Q92900 1129 aaKnown RBP eCLIP24.46■■□□□ 1.516e-8■■■□□ 16.8
TNFRSF1A-205ENST00000534885 OSBP2Q969R2 916 aa24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 LTBP1Q14766 1721 aa24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 ZFYP08048 801 aaPredicted RBP24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 ALDH1B1P30837 517 aa24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 HIBADHP31937 336 aaKnown RBP24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 TBC1D2Q9BYX2 928 aa24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 MAST3O60307 1309 aa24.46■■□□□ 1.51
TNFRSF1A-205ENST00000534885 TMC4Q7Z404 712 aa24.45■■□□□ 1.5
TNFRSF1A-205ENST00000534885 MAP4K1Q92918 833 aa24.45■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ZNF622Q969S3 477 aaKnown RBP eCLIP24.45■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ATP6V0A2Q9Y487 856 aa24.45■■□□□ 1.5
TNFRSF1A-205ENST00000534885 M0R2C6 588 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 UFL1O94874 794 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 CHRNA5P30532 468 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ADD2P35612 726 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 WASHC4Q2M389 1173 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 SLC9C2Q5TAH2 1124 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 OLFM4Q6UX06 510 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 SP8Q8IXZ3 490 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 WWC3Q9ULE0 1092 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 H0YIN7 160 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 PODXL2Q9NZ53 605 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 GGA1Q9UJY5 639 aa24.44■■□□□ 1.5
TNFRSF1A-205ENST00000534885 RBM8AQ9Y5S9 174 aaKnown RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms