RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 DHX57Q6P158 1386 aaKnown RBP12.02□□□□□ -0.49
COMMD9-205ENST00000528608 CPS1P31327 1500 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 IFT172Q9UG01 1749 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 PLA2G4EQ3MJ16 856 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 FCHSD1Q86WN1 690 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 HSH2DQ96JZ2 352 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
COMMD9-205ENST00000528608 PTPRUQ92729 1446 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 LRRC7Q96NW7 1537 aa12.01□□□□□ -0.49
COMMD9-205ENST00000528608 PIK3R2O00459 728 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 LMOD1P29536 600 aaPredicted RBP12□□□□□ -0.49
COMMD9-205ENST00000528608 CRTC2Q53ET0 693 aaPredicted RBP12□□□□□ -0.49
COMMD9-205ENST00000528608 POTEAQ6S8J7 498 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 CHSY3Q70JA7 882 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 SCG3Q8WXD2 468 aaKnown RBP12□□□□□ -0.49
COMMD9-205ENST00000528608 SIN3AQ96ST3 1273 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 ANKIB1Q9P2G1 1089 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 METP08581 1390 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 ATAD2Q6PL18 1390 aa12□□□□□ -0.49
COMMD9-205ENST00000528608 C21orf2O43822 256 aa11.99□□□□□ -0.49
COMMD9-205ENST00000528608 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
COMMD9-205ENST00000528608 FBXO41Q8TF61 875 aa11.99□□□□□ -0.49
COMMD9-205ENST00000528608 HINFPQ9BQA5 517 aa11.99□□□□□ -0.49
COMMD9-205ENST00000528608 NWD1Q149M9 1564 aa11.99□□□□□ -0.49
COMMD9-205ENST00000528608 XIRP1Q702N8 1843 aaKnown RBP11.99□□□□□ -0.49
COMMD9-205ENST00000528608 SETD1AO15047 1707 aaKnown RBP11.98□□□□□ -0.49
COMMD9-205ENST00000528608 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L15C9J2P7 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L10C9JJH3 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L13C9JLJ4 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L12C9JPN9 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L11C9JVI0 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L21D6R901 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L18D6R9N7 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L22D6RA61 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L17D6RBQ6 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L19D6RCP7 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L20D6RJB6 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 GNB5O14775 395 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 USP17L24Q0WX57 530 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 DPYDQ12882 1025 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 PTK7Q13308 1070 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 GRIN2CQ14957 1233 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 CEP63Q96MT8 703 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 VRTNQ9H8Y1 702 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 AMOTL2Q9Y2J4 779 aa11.98□□□□□ -0.49
COMMD9-205ENST00000528608 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 IQSEC2Q5JU85 1478 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 DGKGP49619 791 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
COMMD9-205ENST00000528608 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 SYT9Q86SS6 491 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
COMMD9-205ENST00000528608 ALDH16A1Q8IZ83 802 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
COMMD9-205ENST00000528608 TMEM94Q12767 1356 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 PIK3R4Q99570 1358 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 FAM196BA6NMK8 535 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 MSTNO14793 375 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 STAG2Q8N3U4 1231 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 C2orf49Q9BVC5 232 aaPredicted RBP11.96□□□□□ -0.49
COMMD9-205ENST00000528608 BRD7Q9NPI1 651 aa11.96□□□□□ -0.49
COMMD9-205ENST00000528608 COL8A1P27658 744 aa11.95□□□□□ -0.5
COMMD9-205ENST00000528608 ANKMY2Q8IV38 441 aa11.95□□□□□ -0.5
COMMD9-205ENST00000528608 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
COMMD9-205ENST00000528608 SUV39H2Q9H5I1 410 aa11.95□□□□□ -0.5
COMMD9-205ENST00000528608 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
COMMD9-205ENST00000528608 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 UBAP1LF5GYI3 381 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 LGR5O75473 907 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 NEUROD1Q13562 356 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 HIF1AQ16665 826 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 CFAP70Q5T0N1 1121 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 TMEM132EQ6IEE7 984 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 NKTRP30414 1462 aaKnown RBP11.94□□□□□ -0.5
COMMD9-205ENST00000528608 MYOM2P54296 1465 aa11.94□□□□□ -0.5
COMMD9-205ENST00000528608 XRN1Q8IZH2 1706 aaKnown RBP11.94□□□□□ -0.5
COMMD9-205ENST00000528608 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
COMMD9-205ENST00000528608 ELOA3DA6NLF2 546 aaPredicted RBP11.93□□□□□ -0.5
COMMD9-205ENST00000528608 ALAS2P22557 587 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 TYRO3Q06418 890 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 SPEM2Q0P670 501 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 ELOA3BQ3SY89 546 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 ELOA3Q8NG57 546 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 SLC30A3Q99726 388 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 SPOCK3Q9BQ16 436 aa11.93□□□□□ -0.5
COMMD9-205ENST00000528608 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
COMMD9-205ENST00000528608 NOP53Q9NZM5 478 aaKnown RBP11.93□□□□□ -0.5
COMMD9-205ENST00000528608 KRBA1A5PL33 1030 aa11.92□□□□□ -0.5
COMMD9-205ENST00000528608 SIN3BO75182 1162 aa11.92□□□□□ -0.5
COMMD9-205ENST00000528608 SUZ12Q15022 739 aaKnown RBP11.92□□□□□ -0.5
COMMD9-205ENST00000528608 ITGB2P05107 769 aa11.91□□□□□ -0.5
COMMD9-205ENST00000528608 KCNH4Q9UQ05 1017 aa11.91□□□□□ -0.5
COMMD9-205ENST00000528608 IGFBP4P22692 258 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms