RNA–Protein interactions for RNA: ENST00000528543.1

BBS1-214, Transcript of Bardet-Biedl syndrome 1, humanhuman

TSL 5

Gene BBS1, Length 384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1-214ENST00000528543 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
BBS1-214ENST00000528543 U2AF1Q01081 240 aaKnown RBP eCLIP13.34□□□□□ -0.27
BBS1-214ENST00000528543 NBPF9Q3BBW0 867 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 PRAMEF18Q5VWM3 479 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 GPR153Q6NV75 609 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 ANKRD13DQ6ZTN6 518 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 WNK4Q96J92 1243 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
BBS1-214ENST00000528543 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
BBS1-214ENST00000528543 HSP90B1P14625 803 aaKnown RBP13.33□□□□□ -0.28
BBS1-214ENST00000528543 NKX2-3Q8TAU0 364 aa13.33□□□□□ -0.28
BBS1-214ENST00000528543 DPF3Q92784 378 aa13.33□□□□□ -0.28
BBS1-214ENST00000528543 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
BBS1-214ENST00000528543 COL4A1P02462 1669 aa13.32□□□□□ -0.28
BBS1-214ENST00000528543 GNRH1P01148 92 aa13.32□□□□□ -0.28
BBS1-214ENST00000528543 PDIA6Q15084 440 aa13.32□□□□□ -0.28
BBS1-214ENST00000528543 PPP2R3BQ9Y5P8 575 aa13.32□□□□□ -0.28
BBS1-214ENST00000528543 PTCH2Q9Y6C5 1203 aa13.32□□□□□ -0.28
BBS1-214ENST00000528543 TESPA1A2RU30 521 aaPredicted RBP13.31□□□□□ -0.28
BBS1-214ENST00000528543 PRMT2P55345 433 aa13.31□□□□□ -0.28
BBS1-214ENST00000528543 SCAF8Q9UPN6 1271 aaKnown RBP13.31□□□□□ -0.28
BBS1-214ENST00000528543 OTOFQ9HC10 1997 aa13.31□□□□□ -0.28
BBS1-214ENST00000528543 PRKG1Q13976 671 aa13.3□□□□□ -0.28
BBS1-214ENST00000528543 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
BBS1-214ENST00000528543 THUMPD2Q9BTF0 503 aaKnown RBP13.3□□□□□ -0.28
BBS1-214ENST00000528543 XDHP47989 1333 aa13.3□□□□□ -0.28
BBS1-214ENST00000528543 UNC80Q8N2C7 3258 aa13.29□□□□□ -0.28
BBS1-214ENST00000528543 WDHD1O75717 1129 aaPredicted RBP13.29□□□□□ -0.28
BBS1-214ENST00000528543 STXBP5LQ9Y2K9 1186 aa13.29□□□□□ -0.28
BBS1-214ENST00000528543 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
BBS1-214ENST00000528543 CAPN2P17655 700 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 ATP2B4P23634 1241 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 KIF22Q14807 665 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 DACT2Q5SW24 774 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 STRIP1Q5VSL9 837 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 XAGE3Q8WTP9 111 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 ZFYVE28Q9HCC9 887 aa13.28□□□□□ -0.28
BBS1-214ENST00000528543 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
BBS1-214ENST00000528543 IREB2P48200 963 aaKnown RBP13.27□□□□□ -0.29
BBS1-214ENST00000528543 PROSER3Q2NL68 480 aa13.27□□□□□ -0.29
BBS1-214ENST00000528543 FAM89AQ96GI7 184 aa13.27□□□□□ -0.29
BBS1-214ENST00000528543 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.29
BBS1-214ENST00000528543 BABAM1Q9NWV8 329 aa13.27□□□□□ -0.29
BBS1-214ENST00000528543 MYH3P11055 1940 aa13.27□□□□□ -0.29
BBS1-214ENST00000528543 SSC5DA1L4H1 1573 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 IRS4O14654 1257 aaPredicted RBP13.26□□□□□ -0.29
BBS1-214ENST00000528543 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
BBS1-214ENST00000528543 SASH1O94885 1247 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
BBS1-214ENST00000528543 UBE2Q1Q7Z7E8 422 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 ANKRD13AQ8IZ07 590 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 PLBD2Q8NHP8 589 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 ISCA1Q9BUE6 129 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 TSPYL4Q9UJ04 414 aa13.26□□□□□ -0.29
BBS1-214ENST00000528543 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 GJA8P48165 433 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 CAP1Q01518 475 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
BBS1-214ENST00000528543 TAF1CQ15572 869 aaPredicted RBP13.25□□□□□ -0.29
BBS1-214ENST00000528543 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 SH3TC2Q8TF17 1288 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 PTPN18Q99952 460 aa13.25□□□□□ -0.29
BBS1-214ENST00000528543 COL25A1Q9BXS0 654 aaPredicted RBP13.25□□□□□ -0.29
BBS1-214ENST00000528543 ZCCHC17Q9NP64 241 aaKnown RBP13.25□□□□□ -0.29
BBS1-214ENST00000528543 ZNF804BA4D1E1 1349 aa13.24□□□□□ -0.29
BBS1-214ENST00000528543 WTIPA6NIX2 430 aaPredicted RBP13.24□□□□□ -0.29
BBS1-214ENST00000528543 ANXA1P04083 346 aa13.24□□□□□ -0.29
BBS1-214ENST00000528543 ZBED3Q96IU2 234 aaPredicted RBP13.24□□□□□ -0.29
BBS1-214ENST00000528543 COA1Q9GZY4 146 aa13.24□□□□□ -0.29
BBS1-214ENST00000528543 ZSWIM8A7E2V4 1837 aa13.24□□□□□ -0.29
BBS1-214ENST00000528543 SOX1O00570 391 aaPredicted RBP13.23□□□□□ -0.29
BBS1-214ENST00000528543 MYO1BO43795 1136 aa13.23□□□□□ -0.29
BBS1-214ENST00000528543 MYCP01106 439 aaPredicted RBP13.23□□□□□ -0.29
BBS1-214ENST00000528543 GJB1P08034 283 aa13.23□□□□□ -0.29
BBS1-214ENST00000528543 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
BBS1-214ENST00000528543 HELBQ8NG08 1087 aaPredicted RBP13.23□□□□□ -0.29
BBS1-214ENST00000528543 LRCH3Q96II8 777 aa13.23□□□□□ -0.29
BBS1-214ENST00000528543 GJA5P36382 358 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 GTF2A2P52657 109 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 LACTBP83111 547 aaPredicted RBP13.22□□□□□ -0.29
BBS1-214ENST00000528543 NFE2L2Q16236 605 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 DEFB123Q8N688 67 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 ZBTB38Q8NAP3 1195 aaPredicted RBP13.22□□□□□ -0.29
BBS1-214ENST00000528543 MTMR14Q8NCE2 650 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 OPTNQ96CV9 577 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 MS4A4AQ96JQ5 239 aa13.22□□□□□ -0.29
BBS1-214ENST00000528543 PNNQ9H307 717 aaKnown RBP13.22□□□□□ -0.29
BBS1-214ENST00000528543 EVI5O60447 810 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 TLR2O60603 784 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 HOXD10P28358 340 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 BMP8BP34820 402 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 DLGAP5Q15398 846 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 FBXW7Q969H0 707 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.29
BBS1-214ENST00000528543 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.29
BBS1-214ENST00000528543 FZD1Q9UP38 647 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms