RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 EP400Q96L91 3159 aa16.17■□□□□ 0.18
SEC16B-208ENST00000528461 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
SEC16B-208ENST00000528461 ONECUT3O60422 494 aaPredicted RBP16.17■□□□□ 0.18
SEC16B-208ENST00000528461 TCHHQ07283 1943 aa16.17■□□□□ 0.18
SEC16B-208ENST00000528461 DTNBO60941 627 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 SKOR2Q2VWA4 1001 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 BLOC1S2Q6QNY1 142 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 C3orf67Q6ZVT6 689 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 MROH5Q6ZUA9 1318 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 SNAP23O00161 211 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 PTMSP20962 102 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 ARID4AP29374 1257 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 HELBQ8NG08 1087 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 SH2B1Q9NRF2 756 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 PHKA1P46020 1223 aa16.16■□□□□ 0.18
SEC16B-208ENST00000528461 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 FOXD4L5Q5VV16 416 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 FOXD4L4Q8WXT5 416 aaPredicted RBP16.16■□□□□ 0.18
SEC16B-208ENST00000528461 KLHL40Q2TBA0 621 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 GORABQ5T7V8 394 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 CCDC102BQ68D86 513 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 CCDC83Q8IWF9 413 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 GJD4Q96KN9 370 aaPredicted RBP16.15■□□□□ 0.18
SEC16B-208ENST00000528461 RGL2O15211 777 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 ATRNO75882 1429 aa16.15■□□□□ 0.18
SEC16B-208ENST00000528461 NECAB1Q8N987 351 aa16.14■□□□□ 0.18
SEC16B-208ENST00000528461 NEK1Q96PY6 1258 aa16.14■□□□□ 0.18
SEC16B-208ENST00000528461 PUS7LQ9H0K6 701 aaKnown RBP16.14■□□□□ 0.18
SEC16B-208ENST00000528461 HSPA1LP34931 641 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 KRT32Q14532 448 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 PUM3Q15397 648 aaKnown RBP16.14■□□□□ 0.17
SEC16B-208ENST00000528461 LPIN2Q92539 896 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.17
SEC16B-208ENST00000528461 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 C4BP0C0L5 1744 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 SYT1P21579 422 aa16.14■□□□□ 0.17
SEC16B-208ENST00000528461 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.14■□□□□ 0.17
SEC16B-208ENST00000528461 ERFEQ4G0M1 354 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 GPT2Q8TD30 523 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
SEC16B-208ENST00000528461 CCDC152Q4G0S7 254 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 TBC1D9BQ66K14 1250 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 EXOSC10Q01780 885 aaKnown RBP16.13■□□□□ 0.17
SEC16B-208ENST00000528461 ZNF652Q9Y2D9 606 aa16.13■□□□□ 0.17
SEC16B-208ENST00000528461 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 GAS2L3Q86XJ1 694 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 APPBP2Q92624 585 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 GOLGA6L22H0YM25 854 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 GJB2P29033 226 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 ADD2P35612 726 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 SF3B3Q15393 1217 aaKnown RBP16.12■□□□□ 0.17
SEC16B-208ENST00000528461 AGXT2Q9BYV1 514 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 AFF2P51816 1311 aa16.12■□□□□ 0.17
SEC16B-208ENST00000528461 WDR33Q9C0J8 1336 aaKnown RBP16.12■□□□□ 0.17
SEC16B-208ENST00000528461 TCRBV5S4A2TA0A5A2 114 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 PRPF40AO75400 957 aaKnown RBP16.11■□□□□ 0.17
SEC16B-208ENST00000528461 SLC10A5Q5PT55 438 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 NARFQ9UHQ1 456 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 NSFL1CQ9UNZ2 370 aaKnown RBP16.11■□□□□ 0.17
SEC16B-208ENST00000528461 ANKRD1Q15327 319 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
SEC16B-208ENST00000528461 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 STX6O43752 255 aa16.11■□□□□ 0.17
SEC16B-208ENST00000528461 E7EWF7 191 aa16.1■□□□□ 0.17
SEC16B-208ENST00000528461 ZSCAN22P10073 491 aaPredicted RBP16.1■□□□□ 0.17
SEC16B-208ENST00000528461 MTMR6Q9Y217 621 aa16.1■□□□□ 0.17
SEC16B-208ENST00000528461 WTIPA6NIX2 430 aaPredicted RBP16.1■□□□□ 0.17
SEC16B-208ENST00000528461 Q6ZUG5 572 aa16.1■□□□□ 0.17
SEC16B-208ENST00000528461 DDX49Q9Y6V7 483 aaKnown RBP16.1■□□□□ 0.17
SEC16B-208ENST00000528461 RASGRF1Q13972 1273 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 FGAP02671 866 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
SEC16B-208ENST00000528461 CHRNDQ07001 517 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
SEC16B-208ENST00000528461 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
SEC16B-208ENST00000528461 DHX32Q7L7V1 743 aaKnown RBP16.08■□□□□ 0.17
SEC16B-208ENST00000528461 GPAA1O43292 621 aa16.08■□□□□ 0.16
SEC16B-208ENST00000528461 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
SEC16B-208ENST00000528461 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
SEC16B-208ENST00000528461 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.16
SEC16B-208ENST00000528461 LRRC2Q9BYS8 371 aa16.08■□□□□ 0.16
SEC16B-208ENST00000528461 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
SEC16B-208ENST00000528461 SLC5A1P13866 664 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 HSP90B1P14625 803 aaKnown RBP16.07■□□□□ 0.16
SEC16B-208ENST00000528461 TTF1Q15361 905 aaPredicted RBP16.07■□□□□ 0.16
SEC16B-208ENST00000528461 SLC9C2Q5TAH2 1124 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 GNPATO15228 680 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 F13A1P00488 732 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
SEC16B-208ENST00000528461 FBXL16Q8N461 479 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 ARHGEF1Q92888 912 aaKnown RBP16.07■□□□□ 0.16
SEC16B-208ENST00000528461 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
SEC16B-208ENST00000528461 TNRC6CQ9HCJ0 1690 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms