RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 PDCP20941 246 aa17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 ZAP70P43403 619 aa17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 PKP1Q13835 747 aa17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 BTAF1O14981 1849 aa17.57■□□□□ 0.4
ECHDC1-220ENST00000528402 MAST3O60307 1309 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 CYP21A2P08686 494 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 CCDC129Q6ZRS4 1044 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 LMBRD1Q9NUN5 540 aa17.56■□□□□ 0.4
ECHDC1-220ENST00000528402 GOLGA6L3A6NEY3 463 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 CPA1P15085 419 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 WASHC4Q2M389 1173 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 DHX32Q7L7V1 743 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 DDX49Q9Y6V7 483 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 STX6O43752 255 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 ZPR1O75312 459 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 MCAMP43121 646 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 ME3Q16798 604 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 FBXL16Q8N461 479 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 OSBP2Q969R2 916 aa17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 RTCBQ9Y3I0 505 aaKnown RBP17.55■□□□□ 0.4
ECHDC1-220ENST00000528402 ATRNO75882 1429 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 SCN7AQ01118 1682 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 FSD2A1L4K1 749 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 MBD3O95983 291 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 ADD2P35612 726 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 IMMTQ16891 758 aaKnown RBP17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 CCDC83Q8IWF9 413 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 CCNL1Q9UK58 526 aaPredicted RBP17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 TPCN1Q9ULQ1 816 aa17.54■□□□□ 0.4
ECHDC1-220ENST00000528402 LY75O60449 1722 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 FAM177BA6PVY3 158 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 GJB2P29033 226 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 GTF2E1P29083 439 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 TOB2Q14106 344 aaPredicted RBP17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 SCARF1Q14162 830 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 ANKRD18AQ8IVF6 992 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
ECHDC1-220ENST00000528402 SBF2Q86WG5 1849 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 M0R2C6 588 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 NCLP19338 710 aaKnown RBP17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 SYT1P21579 422 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 TPTE2Q6XPS3 522 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 AGXT2Q9BYV1 514 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 BSDC1Q9NW68 430 aaPredicted RBP17.52■□□□□ 0.4
ECHDC1-220ENST00000528402 AFF2P51816 1311 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 PRPF40AO75400 957 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 MRE11P49959 708 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 EXOSC10Q01780 885 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 UBE4AQ14139 1066 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 KLHL34Q8N239 644 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 SPATA5Q8NB90 893 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
ECHDC1-220ENST00000528402 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 TAF1LQ8IZX4 1826 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 E7EWF7 191 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 LARGE1O95461 756 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 ADRA2BP18089 450 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 PHKA1P46020 1223 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 FGD1P98174 961 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 SLC9C2Q5TAH2 1124 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 Q6ZUG5 572 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 POTEDQ86YR6 584 aa17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 BCL11BQ9C0K0 894 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 GZF1Q9H116 711 aaPredicted RBP17.5■□□□□ 0.39
ECHDC1-220ENST00000528402 ZBTB22O15209 634 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 GNPATO15228 680 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 F13A1P00488 732 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 CHRNDQ07001 517 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 ALX1Q15699 326 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 ZMYM6O95789 1325 aa17.49■□□□□ 0.39
ECHDC1-220ENST00000528402 GPAA1O43292 621 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 IGSF3O75054 1194 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 CHGBP05060 677 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 HSPA1LP34931 641 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 LARP1BQ659C4 914 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 TMED8Q6PL24 325 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 SEPT12Q8IYM1 358 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 GTF3C6Q969F1 213 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 LARP6Q9BRS8 491 aaKnown RBP17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 COL24A1Q17RW2 1714 aa17.48■□□□□ 0.39
ECHDC1-220ENST00000528402 ZNF213O14771 459 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms