RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 ZNF526Q8TF50 670 aaPredicted RBP11.52□□□□□ -0.57
SF3B2-206ENST00000528302 NEURL1BA8MQ27 555 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 POLR3GO15318 223 aaPredicted RBP11.52□□□□□ -0.57
SF3B2-206ENST00000528302 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 NDUFA8P51970 172 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 NSUN7Q8NE18 718 aaKnown RBP11.52□□□□□ -0.57
SF3B2-206ENST00000528302 IL17RAQ96F46 866 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 CLIC4Q9Y696 253 aa11.52□□□□□ -0.57
SF3B2-206ENST00000528302 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 ELP1O95163 1332 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 GCKRQ14397 625 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 ZNF496Q96IT1 587 aaPredicted RBP11.51□□□□□ -0.57
SF3B2-206ENST00000528302 AIFM3Q96NN9 605 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
SF3B2-206ENST00000528302 MCMDC2Q4G0Z9 681 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 SPECC1Q5M775 1068 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 CEP57L1Q8IYX8 460 aa11.51□□□□□ -0.57
SF3B2-206ENST00000528302 NPHP4O75161 1426 aaPredicted RBP11.51□□□□□ -0.57
SF3B2-206ENST00000528302 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 ATP1A3P13637 1013 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 ANKRD13DQ6ZTN6 518 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 CCDC82Q8N4S0 544 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 RAPGEF4Q8WZA2 1011 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 ZSWIM4Q9H7M6 989 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 OGFRQ9NZT2 677 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 TOPAZ1Q8N9V7 1692 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 GTPBP4Q9BZE4 634 aaKnown RBP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 ZBTB3Q9H5J0 574 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 DDX21Q9NR30 783 aaKnown RBP eCLIP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 PXDNQ92626 1479 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 EPB41L2O43491 1005 aaKnown RBP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 PTPN12Q05209 780 aaKnown RBP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
SF3B2-206ENST00000528302 PI16Q6UXB8 463 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 KIF18AQ8NI77 898 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 PRDM16Q9HAZ2 1276 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 DNAI1Q9UI46 699 aa11.5□□□□□ -0.57
SF3B2-206ENST00000528302 USP42Q9H9J4 1324 aaKnown RBP11.49□□□□□ -0.57
SF3B2-206ENST00000528302 RAD21O60216 631 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 MTX1Q13505 466 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
SF3B2-206ENST00000528302 LRRC24Q50LG9 513 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 PDILTQ8N807 584 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 ZNF609O15014 1411 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
SF3B2-206ENST00000528302 CPLX1O14810 134 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 CCZ1BP86790 482 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 CCZ1P86791 482 aaPredicted RBP11.49□□□□□ -0.57
SF3B2-206ENST00000528302 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 KCNH5Q8NCM2 988 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 ANO10Q9NW15 660 aa11.49□□□□□ -0.57
SF3B2-206ENST00000528302 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 PDIA6Q15084 440 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 UTP14CQ5TAP6 766 aaKnown RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 ZNF790Q6PG37 636 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 DHX32Q7L7V1 743 aaKnown RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 E7EWF7 191 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 KRT32Q14532 448 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 TTC5Q8N0Z6 440 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 KCNB2Q92953 911 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 PUS3Q9BZE2 481 aaKnown RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 HMG20BQ9P0W2 317 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 ARHGAP23Q9P227 1491 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 UBE2Q2LH0YL09 131 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 URI1O94763 535 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 APPP05067 770 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 ATF3P18847 181 aa11.48□□□□□ -0.57
SF3B2-206ENST00000528302 DDX41Q9UJV9 622 aaKnown RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 U3KPZ7 1027 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-206ENST00000528302 GOLGA8BA8MQT2 603 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SFPQP23246 707 aaKnown RBP eCLIP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 FAM160A1Q05DH4 1040 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 CREBRFQ8IUR6 639 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 C8orf76Q96K31 380 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 ZSCAN16Q9H4T2 348 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 PAG1Q9NWQ8 432 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 CEMIPQ8WUJ3 1361 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 MED23Q9ULK4 1368 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 LTN1O94822 1766 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 NALCNQ8IZF0 1738 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 KLF18A0A0U1RQI7 1052 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SEC31AO94979 1220 aaKnown RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SERPINC1P01008 464 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 IFIT1P09914 478 aaKnown RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 CFAP100Q494V2 611 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 ARHGAP29Q52LW3 1261 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 ILDR1Q86SU0 546 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 MRPS27Q92552 414 aaKnown RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 STRN4Q9NRL3 753 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 ORC3Q9UBD5 711 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SLIT1O75093 1534 aa11.47□□□□□ -0.57
SF3B2-206ENST00000528302 SLC3A2P08195 630 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms