RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NEK1Q96PY6 1258 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 LRRC2Q9BYS8 371 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 CFAP45Q9UL16 551 aa14.69□□□□□ -0.06
CAPN1-208ENST00000527323 NAP1L2Q9ULW6 460 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-208ENST00000527323 NCBP1Q09161 790 aaKnown RBP14.68□□□□□ -0.06
CAPN1-208ENST00000527323 KRT32Q14532 448 aa14.68□□□□□ -0.06
CAPN1-208ENST00000527323 NAA30Q147X3 362 aaPredicted RBP14.68□□□□□ -0.06
CAPN1-208ENST00000527323 Q6ZUG5 572 aa14.68□□□□□ -0.06
CAPN1-208ENST00000527323 TBC1D2BQ9UPU7 963 aa14.68□□□□□ -0.06
CAPN1-208ENST00000527323 AFF2P51816 1311 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 TAF5LO75529 589 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 GPTP24298 496 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 SYNE4Q8N205 404 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 FBXW7Q969H0 707 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 PAXBP1Q9Y5B6 917 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 NDUFB9Q9Y6M9 179 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 ABCA3Q99758 1704 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 CCDC144BQ3MJ40 725 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 KAZALD1Q96I82 304 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.67□□□□□ -0.06
CAPN1-208ENST00000527323 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-208ENST00000527323 FILIP1Q7Z7B0 1213 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 GTF3C6Q969F1 213 aa14.67□□□□□ -0.06
CAPN1-208ENST00000527323 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
CAPN1-208ENST00000527323 CEP135Q66GS9 1140 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 LRRC37A3O60309 1634 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 NEXNQ0ZGT2 675 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 RESTQ13127 1097 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 RBM43Q6ZSC3 357 aaKnown RBP14.66□□□□□ -0.06
CAPN1-208ENST00000527323 CCAR1Q8IX12 1150 aaKnown RBP14.66□□□□□ -0.06
CAPN1-208ENST00000527323 FEZ1Q99689 392 aa14.66□□□□□ -0.06
CAPN1-208ENST00000527323 ALDH8A1Q9H2A2 487 aaPredicted RBP14.66□□□□□ -0.06
CAPN1-208ENST00000527323 ZSCAN16Q9H4T2 348 aaPredicted RBP14.66□□□□□ -0.06
CAPN1-208ENST00000527323 PPFIA3O75145 1194 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 LRP6O75581 1613 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 SPATA31A5Q5VU36 1347 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 SPATA31A7Q8IWB4 1347 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 CAVIN2O95810 425 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 ARID5BQ14865 1188 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 CCDC73Q6ZRK6 1079 aa14.65□□□□□ -0.06
CAPN1-208ENST00000527323 TRMT1Q9NXH9 659 aaKnown RBP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 OGFRQ9NZT2 677 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 A0A087WWV3 80 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 SKILP12757 684 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 PTPN14Q15678 1187 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 C11orf57Q6ZUT1 292 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 LRRC8AQ8IWT6 810 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 SEC62Q99442 399 aaKnown RBP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 SNRKQ9NRH2 765 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 KINO60870 393 aaKnown RBP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 STX1AQ16623 288 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 TSGA10IPQ3SY00 556 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 ANKRD13DQ6ZTN6 518 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 CCDC24Q8N4L8 307 aa14.64□□□□□ -0.07
CAPN1-208ENST00000527323 FTOQ9C0B1 505 aaKnown RBP eCLIP14.64□□□□□ -0.07
CAPN1-208ENST00000527323 JCADQ9P266 1359 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 CHGBP05060 677 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 ZNF771Q7L3S4 317 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-208ENST00000527323 CGNQ9P2M7 1197 aaKnown RBP14.63□□□□□ -0.07
CAPN1-208ENST00000527323 ZBTB1Q9Y2K1 713 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-208ENST00000527323 MED23Q9ULK4 1368 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 IGKV5-2P06315 115 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 CCT2P78371 535 aaKnown RBP14.63□□□□□ -0.07
CAPN1-208ENST00000527323 UBE3BQ7Z3V4 1068 aa14.63□□□□□ -0.07
CAPN1-208ENST00000527323 QTRT2Q9H974 415 aaKnown RBP14.63□□□□□ -0.07
CAPN1-208ENST00000527323 CTAGE5O15320 804 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 ATP6V1AP38606 617 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 GUCY1B3Q02153 619 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 SCRN1Q12765 414 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN1-208ENST00000527323 V9GYY5 206 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-208ENST00000527323 ME1P48163 572 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 IQCB1Q15051 598 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 ERCC4Q92889 916 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-208ENST00000527323 ERVV-2B6SEH9 535 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 KIF20AO95235 890 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 CYP21A2P08686 494 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 TFCP2Q12800 502 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 EPHA10Q5JZY3 1008 aa14.62□□□□□ -0.07
CAPN1-208ENST00000527323 AHDC1Q5TGY3 1603 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-208ENST00000527323 BCL9LQ86UU0 1499 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 CCDC69A6NI79 296 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 USP27XA6NNY8 438 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 NEMFO60524 1076 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 CDC25BP30305 580 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 SYCP1Q15431 976 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 ZRSR1Q15695 479 aaKnown RBP14.61□□□□□ -0.07
CAPN1-208ENST00000527323 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
CAPN1-208ENST00000527323 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 DBNLQ9UJU6 430 aaKnown RBP14.61□□□□□ -0.07
CAPN1-208ENST00000527323 ATP5JP18859 108 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 HLFQ16534 295 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 MCMDC2Q4G0Z9 681 aa14.61□□□□□ -0.07
CAPN1-208ENST00000527323 USPL1Q5W0Q7 1092 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms