RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 RFX1P22670 979 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 GNAI1P63096 354 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 DCAF5Q96JK2 942 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 SCN11AQ9UI33 1791 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
CCDC90B-206ENST00000526265 TNFRSF10AO00220 468 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 RAB15P59190 212 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 TOR4AQ9NXH8 423 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 PCDHB11Q9Y5F2 797 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 GLI3P10071 1580 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 CEMIPQ8WUJ3 1361 aa12.98□□□□□ -0.33
CCDC90B-206ENST00000526265 THSD7AQ9UPZ6 1657 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 TTC24A2A3L6 582 aaPredicted RBP12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 ERVH48-1M5A8F1 160 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 CYP27B1O15528 508 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 NCOA4Q13772 614 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 EML3Q32P44 896 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 TSGA10IPQ3SY00 556 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 WASF2Q9Y6W5 498 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 LRRC37A3O60309 1634 aa12.97□□□□□ -0.33
CCDC90B-206ENST00000526265 TEFQ10587 303 aa12.96□□□□□ -0.33
CCDC90B-206ENST00000526265 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 ERVV-2B6SEH9 535 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 RNMTO43148 476 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 TAF7Q15545 349 aaPredicted RBP12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 MCM10Q7L590 875 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 TRMT2AQ8IZ69 625 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 IL17REQ8NFR9 667 aa12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 DDX54Q8TDD1 881 aaKnown RBP12.96□□□□□ -0.34
CCDC90B-206ENST00000526265 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.95□□□□□ -0.34
CCDC90B-206ENST00000526265 MYT1Q01538 1121 aa12.95□□□□□ -0.34
CCDC90B-206ENST00000526265 OXLD1Q5BKU9 147 aa12.95□□□□□ -0.34
CCDC90B-206ENST00000526265 ARXQ96QS3 562 aa12.95□□□□□ -0.34
CCDC90B-206ENST00000526265 NR3C2P08235 984 aa12.94□□□□□ -0.34
CCDC90B-206ENST00000526265 ZNF853P0CG23 659 aa12.94□□□□□ -0.34
CCDC90B-206ENST00000526265 NNTQ13423 1086 aa12.94□□□□□ -0.34
CCDC90B-206ENST00000526265 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
CCDC90B-206ENST00000526265 VRTNQ9H8Y1 702 aa12.94□□□□□ -0.34
CCDC90B-206ENST00000526265 MRC1P22897 1456 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 CHL1O00533 1208 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 CT47B1P0C2W7 299 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 RXRBP28702 533 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 USP4Q13107 963 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 LGR6Q9HBX8 967 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 NOD1Q9Y239 953 aa12.93□□□□□ -0.34
CCDC90B-206ENST00000526265 KDM6AO15550 1401 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 J3QL48 77 aa12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 CABP4P57796 275 aa12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 DUSP27Q5VZP5 1158 aa12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 CHMP4AQ9BY43 222 aa12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 SLC52A2Q9HAB3 445 aa12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 LAS1LQ9Y4W2 734 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-206ENST00000526265 BCL9O00512 1426 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 TRIM50Q86XT4 487 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 PGPEP1Q9NXJ5 209 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 SOS1Q07889 1333 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 FANCIQ9NVI1 1328 aa12.91□□□□□ -0.34
CCDC90B-206ENST00000526265 BTBD11A6QL63 1104 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 MYCP01106 439 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 SMPD1P17405 629 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 ZNF428Q96B54 188 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 TMPRSS4Q9NRS4 437 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 KDM3BQ7LBC6 1761 aa12.9□□□□□ -0.34
CCDC90B-206ENST00000526265 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 MARCH10Q8NA82 808 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 ZNF784Q8NCA9 323 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 MBIPQ9NS73 344 aa12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 ITGB4P16144 1822 aa12.89□□□□□ -0.35
CCDC90B-206ENST00000526265 ATP1A2P50993 1020 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 TOGARAM1Q9Y4F4 1720 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 ATG7O95352 703 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 SCTRP47872 440 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 TTC5Q8N0Z6 440 aa12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-206ENST00000526265 FAM196BA6NMK8 535 aa12.87□□□□□ -0.35
CCDC90B-206ENST00000526265 KRT27Q7Z3Y8 459 aa12.87□□□□□ -0.35
CCDC90B-206ENST00000526265 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
CCDC90B-206ENST00000526265 CYLDQ9NQC7 956 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms