RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 ZIC5Q96T25 663 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 TMPRSS4Q9NRS4 437 aa5.25□□□□□ -1.57
CSDE1-209ENST00000525132 DCHS1Q96JQ0 3298 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 TEP1Q99973 2627 aaKnown RBP5.24□□□□□ -1.57
CSDE1-209ENST00000525132 QSER1Q2KHR3 1735 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 NALCNQ8IZF0 1738 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 AXIN1O15169 862 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 SCTRP47872 440 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 FAM117BQ6P1L5 589 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 SMIM5Q71RC9 77 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 LDHDQ86WU2 507 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 DPF3Q92784 378 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 UHRF1Q96T88 793 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-209ENST00000525132 ZMYND15Q9H091 742 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 ATP13A2Q9NQ11 1180 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 ZNF330Q9Y3S2 320 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-209ENST00000525132 SPTBN4Q9H254 2564 aa5.24□□□□□ -1.57
CSDE1-209ENST00000525132 IRS2Q9Y4H2 1338 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 CAPN5O15484 640 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-209ENST00000525132 CBLBQ13191 982 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 IDI1Q13907 227 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 GLMNQ92990 594 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 OSBPL3Q9H4L5 887 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 HRH3Q9Y5N1 445 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 PIK3R4Q99570 1358 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 CDC42BPBQ9Y5S2 1711 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 ADAMTS13Q76LX8 1427 aa5.23□□□□□ -1.57
CSDE1-209ENST00000525132 DHX29Q7Z478 1369 aaKnown RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 FAM86C2PA6NEL3 165 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 TRPA1O75762 1119 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 ADH1AP07327 375 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 BMP1P13497 986 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 FMR1Q06787 632 aaKnown RBP eCLIP5.22□□□□□ -1.572e-19■□□□□ 8.5
CSDE1-209ENST00000525132 ST3GAL2Q16842 350 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 AKAP4Q5JQC9 854 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 RNF20Q5VTR2 975 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 MRPL14Q6P1L8 145 aaKnown RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 FBXO46Q6PJ61 603 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 PLEKHM2Q8IWE5 1019 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 HIRIP3Q9BW71 556 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 C1orf115Q9H7X2 142 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 C11orf16Q9NQ32 467 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 SH2B1Q9NRF2 756 aaPredicted RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 PODXL2Q9NZ53 605 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 GMPR2Q9P2T1 348 aaKnown RBP5.22□□□□□ -1.57
CSDE1-209ENST00000525132 STAP2Q9UGK3 403 aa5.22□□□□□ -1.57
CSDE1-209ENST00000525132 ATP7BP35670 1465 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 SPINT1O43278 529 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 MAP7D1Q3KQU3 841 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 HDGFL1Q5TGJ6 251 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 CNTROBQ8N137 903 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 LINC00528Q8N1L1 170 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 PLPP7Q8NBV4 271 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 TRIM47Q96LD4 638 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 FBXL18Q96ME1 805 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 PGPEP1Q9NXJ5 209 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 SBF1O95248 1867 aa5.21□□□□□ -1.58
CSDE1-209ENST00000525132 COL14A1Q05707 1796 aaKnown RBP5.21□□□□□ -1.58
CSDE1-209ENST00000525132 INO80Q9ULG1 1556 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-209ENST00000525132 TUBGCP6Q96RT7 1819 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 BRD4O60885 1362 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 ANKRD17O75179 2603 aaKnown RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 SMIM22K7EJ46 135 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 DKK1O94907 266 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 KCNQ4P56696 695 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 SRPK2P78362 688 aaKnown RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 SEMA3FQ13275 785 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 INTS3Q68E01 1043 aaKnown RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 CC2D2BQ6DHV5 1058 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 TBC1D9Q6ZT07 1266 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 RNF135Q8IUD6 432 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 WWC1Q8IX03 1113 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 TCP11L2Q8N4U5 519 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 HDAC9Q9UKV0 1011 aa5.2□□□□□ -1.58
CSDE1-209ENST00000525132 ZNF777Q9ULD5 760 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 GCN1Q92616 2671 aaKnown RBP5.2□□□□□ -1.58
CSDE1-209ENST00000525132 LRPPRCP42704 1394 aaKnown RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 ATP9BO43861 1147 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 SCNN1DP51172 638 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 CFAP70Q5T0N1 1121 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 MAP1SQ66K74 1059 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 KCTD17Q8N5Z5 321 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 MARCH10Q8NA82 808 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 ZFP42Q96MM3 310 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 NECAB3Q96P71 396 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 CYLDQ9NQC7 956 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 DDX21Q9NR30 783 aaKnown RBP eCLIP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 RNF186Q9NXI6 227 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 SAGE1Q9NXZ1 904 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 PCDHB11Q9Y5F2 797 aa5.19□□□□□ -1.58
CSDE1-209ENST00000525132 MAFBQ9Y5Q3 323 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 N4BP2Q86UW6 1770 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-209ENST00000525132 USP17L5A8MUK1 530 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 WASLO00401 505 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-209ENST00000525132 LZTS3O60299 673 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-209ENST00000525132 RASSF7Q02833 373 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 LRIT3Q3SXY7 679 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 SLFNL1Q499Z3 407 aa5.18□□□□□ -1.58
CSDE1-209ENST00000525132 FOXD4L5Q5VV16 416 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-209ENST00000525132 CST9Q5W186 159 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms