RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SUSD4Q5VX71 490 aa10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 RBM17Q96I25 401 aaKnown RBP10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
DEPDC1-205ENST00000525124 PSME4Q14997 1843 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 EIF6P56537 245 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 NGEFQ8N5V2 710 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 NLRP3Q96P20 1036 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 THUMPD2Q9BTF0 503 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 ZBTB3Q9H5J0 574 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 TSPYL4Q9UJ04 414 aa10.98□□□□□ -0.65
DEPDC1-205ENST00000525124 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 PPEF1O14829 653 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 GPTP24298 496 aa10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 RIPK4P57078 832 aa10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 HSP90AB3PQ58FF7 597 aa10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 RTFDC1Q9BY42 306 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 PRDM10Q9NQV6 1147 aa10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 NPDC1Q9NQX5 325 aaPredicted RBP10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 MKRN1Q9UHC7 482 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
DEPDC1-205ENST00000525124 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 EAPPQ56P03 285 aaPredicted RBP10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 USP50Q70EL3 339 aaPredicted RBP10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 TTC13Q8NBP0 860 aa10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 UTP14AQ9BVJ6 771 aaKnown RBP10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 ATP6V0A2Q9Y487 856 aa10.96□□□□□ -0.65
DEPDC1-205ENST00000525124 MYH3P11055 1940 aa10.96□□□□□ -0.66
DEPDC1-205ENST00000525124 ABCC4O15439 1325 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 CDHR2Q9BYE9 1310 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 LMOD1P29536 600 aaPredicted RBP10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 SCNN1DP51172 638 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 SUPT20HQ8NEM7 779 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 DDX21Q9NR30 783 aaKnown RBP eCLIP10.95□□□□□ -0.66
DEPDC1-205ENST00000525124 DUOX1Q9NRD9 1551 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 FOXN1O15353 648 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 RNF40O75150 1001 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 BBOX1O75936 387 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 HOXB7P09629 217 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 VEGFBP49765 207 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 DEFB115Q30KQ5 88 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 SP8Q8IXZ3 490 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 NIM1KQ8IY84 436 aa10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
DEPDC1-205ENST00000525124 MYBBP1AQ9BQG0 1328 aaKnown RBP10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 CHL1O00533 1208 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 EIF2S2P20042 333 aaKnown RBP10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 CTCFP49711 727 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 PROSER3Q2NL68 480 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 MAP1SQ66K74 1059 aaPredicted RBP10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 TRAF7Q6Q0C0 670 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 COPS6Q7L5N1 327 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 NLRP10Q86W26 655 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 NKX2-3Q8TAU0 364 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 ADARB2Q9NS39 739 aaKnown RBP10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 GJA3Q9Y6H8 435 aa10.93□□□□□ -0.66
DEPDC1-205ENST00000525124 WDR33Q9C0J8 1336 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 PPIP5K2O43314 1243 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 EPS15P42566 896 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 PADI6Q6TGC4 694 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 AIDAQ96BJ3 306 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 RUNDC1Q96C34 613 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 PGAP2Q9UHJ9 254 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 ZNRF3Q9ULT6 936 aa10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 V9GY48 417 aaPredicted RBP10.92□□□□□ -0.66
DEPDC1-205ENST00000525124 SH3TC1Q8TE82 1336 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 MAP2K1Q02750 393 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 GRAPQ13588 217 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 AOC3Q16853 763 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 SWT1Q5T5J6 900 aaKnown RBP10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 MPNDQ8N594 471 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 GPRC5DQ9NZD1 345 aa10.91□□□□□ -0.66
DEPDC1-205ENST00000525124 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 AKAP11Q9UKA4 1901 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 ANXA1P04083 346 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 ECE1P42892 770 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 CXCL9Q07325 125 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 DPP8Q6V1X1 898 aaPredicted RBP10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 DDX46Q7L014 1031 aaKnown RBP10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 PLBD2Q8NHP8 589 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 ZC3H15Q8WU90 426 aaKnown RBP10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 HHIPL1Q96JK4 782 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 ISCA1Q9BUE6 129 aa10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
DEPDC1-205ENST00000525124 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms