RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TMED8Q6PL24 325 aaPredicted RBP11.93□□□□□ -0.5
VPS13B-212ENST00000524330 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 APPBP2Q92624 585 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
VPS13B-212ENST00000524330 KCNB2Q92953 911 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
VPS13B-212ENST00000524330 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
VPS13B-212ENST00000524330 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 SNX14Q9Y5W7 946 aa11.93□□□□□ -0.5
VPS13B-212ENST00000524330 C4AP0C0L4 1744 aa11.92□□□□□ -0.5
VPS13B-212ENST00000524330 ARAP2Q8WZ64 1704 aa11.92□□□□□ -0.5
VPS13B-212ENST00000524330 TAF5LO75529 589 aa11.92□□□□□ -0.5
VPS13B-212ENST00000524330 SF3B2Q13435 895 aaKnown RBP11.92□□□□□ -0.5
VPS13B-212ENST00000524330 NECTIN1Q15223 517 aa11.92□□□□□ -0.5
VPS13B-212ENST00000524330 TMX4Q9H1E5 349 aaPredicted RBP11.92□□□□□ -0.5
VPS13B-212ENST00000524330 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 SERPINB2P05120 415 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 PDIA4P13667 645 aaKnown RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 GYS1P13807 737 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 ZAP70P43403 619 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 PTH1RQ03431 593 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 TSGA10IPQ3SY00 556 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 BLOC1S2Q6QNY1 142 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 SPATA5Q8NB90 893 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 SPRYD3Q8NCJ5 442 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 EDC3Q96F86 508 aaKnown RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 JAKMIP1Q96N16 626 aaKnown RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 GBP4Q96PP9 640 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
VPS13B-212ENST00000524330 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 DENND2AQ9ULE3 1009 aa11.91□□□□□ -0.5
VPS13B-212ENST00000524330 SLC27A2O14975 620 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 FRAT2O75474 233 aaPredicted RBP11.9□□□□□ -0.5
VPS13B-212ENST00000524330 CASTP20810 708 aaKnown RBP11.9□□□□□ -0.5
VPS13B-212ENST00000524330 MCAMP43121 646 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 PHKA1P46020 1223 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 GRAPQ13588 217 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 GRAPLQ8TC17 118 aaPredicted RBP11.9□□□□□ -0.5
VPS13B-212ENST00000524330 ANTXR1Q9H6X2 564 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 ZSWIM6Q9HCJ5 1215 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 PALD1Q9ULE6 856 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 MINPP1Q9UNW1 487 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 LIMCH1Q9UPQ0 1083 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 LEMD3Q9Y2U8 911 aa11.9□□□□□ -0.5
VPS13B-212ENST00000524330 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
VPS13B-212ENST00000524330 GOLGA6L22H0YM25 854 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 ZBTB22O15209 634 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 IDH1O75874 414 aaKnown RBP11.89□□□□□ -0.51
VPS13B-212ENST00000524330 TM4SF1P30408 202 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 NBR1Q14596 966 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 IMMTQ16891 758 aaKnown RBP11.89□□□□□ -0.51
VPS13B-212ENST00000524330 SLC9C2Q5TAH2 1124 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 RUFY3Q7L099 469 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 ZGPATQ8N5A5 531 aaKnown RBP11.89□□□□□ -0.51
VPS13B-212ENST00000524330 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
VPS13B-212ENST00000524330 RGPD3A6NKT7 1758 aaPredicted RBP11.89□□□□□ -0.51
VPS13B-212ENST00000524330 RGPD4Q7Z3J3 1758 aa11.89□□□□□ -0.51
VPS13B-212ENST00000524330 PDS5AQ29RF7 1337 aaKnown RBP11.88□□□□□ -0.51
VPS13B-212ENST00000524330 BBOX1O75936 387 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 GNAT2P19087 354 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 ADD2P35612 726 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 FGD1P98174 961 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
VPS13B-212ENST00000524330 PRR5LQ6MZQ0 368 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 ZNF589Q86UQ0 364 aaPredicted RBP11.88□□□□□ -0.51
VPS13B-212ENST00000524330 CELF1Q92879 486 aaKnown RBP11.88□□□□□ -0.51
VPS13B-212ENST00000524330 AIDAQ96BJ3 306 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 TMX3Q96JJ7 454 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 NEK1Q96PY6 1258 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 UPF3BQ9BZI7 483 aaKnown RBP11.88□□□□□ -0.51
VPS13B-212ENST00000524330 IL25Q9H293 177 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 LRP2BPQ9P2M1 347 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 PARP3Q9Y6F1 533 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
VPS13B-212ENST00000524330 MAST3O60307 1309 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 HIBADHP31937 336 aaKnown RBP11.87□□□□□ -0.51
VPS13B-212ENST00000524330 CUL4AQ13619 759 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 NFKBIBQ15653 356 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 RASEFQ8IZ41 740 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 NACAP1Q9BZK3 213 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 ANKIB1Q9P2G1 1089 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 MYH7P12883 1935 aa11.87□□□□□ -0.51
VPS13B-212ENST00000524330 RPAP1Q9BWH6 1393 aaPredicted RBP11.87□□□□□ -0.51
VPS13B-212ENST00000524330 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 XDHP47989 1333 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
VPS13B-212ENST00000524330 CYP2E1P05181 493 aaPredicted RBP11.86□□□□□ -0.51
VPS13B-212ENST00000524330 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
VPS13B-212ENST00000524330 PDE6AP16499 860 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 PDE6BP35913 854 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 BAG6P46379 1132 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 BCAMP50895 628 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms