RNA–Protein interactions for RNA: ENST00000523832.1

CDKL3-210, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL3, Length 1,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-210ENST00000523832 BSDC1Q9NW68 430 aaPredicted RBP6.54□□□□□ -1.36
CDKL3-210ENST00000523832 CNTN3Q9P232 1028 aa6.54□□□□□ -1.36
CDKL3-210ENST00000523832 MSRB2Q9Y3D2 182 aa6.54□□□□□ -1.36
CDKL3-210ENST00000523832 PAX3P23760 479 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 SCTRP47872 440 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 KRT76Q01546 638 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 ZFYVE27Q5T4F4 411 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
CDKL3-210ENST00000523832 FAM13BQ9NYF5 915 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 ADAMTS1Q9UHI8 967 aa6.53□□□□□ -1.36
CDKL3-210ENST00000523832 THRAP3Q9Y2W1 955 aaKnown RBP6.53□□□□□ -1.36
CDKL3-210ENST00000523832 CAND2O75155 1236 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 NOS2P35228 1153 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 ERVK-9P63128 1117 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 HDAC1Q13547 482 aaPredicted RBP6.52□□□□□ -1.37
CDKL3-210ENST00000523832 C8orf34Q49A92 452 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 MAP9Q49MG5 647 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 TNNI3KQ59H18 835 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 PGBD3Q8N328 593 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 CCDC74AQ96AQ1 378 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 APBA2Q99767 749 aa6.52□□□□□ -1.37
CDKL3-210ENST00000523832 A6NJY4 79 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 ITGA6P23229 1130 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 EIF4A3P38919 411 aaKnown RBP6.51□□□□□ -1.37
CDKL3-210ENST00000523832 PTGIRP43119 386 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 TBCELQ5QJ74 424 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 SYNPOQ8N3V7 929 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 NUDT16Q96DE0 195 aaKnown RBP6.51□□□□□ -1.37
CDKL3-210ENST00000523832 ANAPC16Q96DE5 110 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 IFT43Q96FT9 208 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
CDKL3-210ENST00000523832 GNALP38405 381 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 SAFB2Q14151 953 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 MTFR1Q15390 333 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 ESCO1Q5FWF5 840 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 POTEAQ6S8J7 498 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 PI16Q6UXB8 463 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 NME8Q8N427 588 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 EPS8L3Q8TE67 593 aaKnown RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 NT5C1AQ9BXI3 368 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 COL25A1Q9BXS0 654 aaPredicted RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 GGNBP2Q9H3C7 697 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 OSBPL3Q9H4L5 887 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 ETNK1Q9HBU6 452 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 LAS1LQ9Y4W2 734 aaKnown RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 SENP3-EIF4A1A0A087X0R7 540 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 PDPK1O15530 556 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 SMTNP53814 917 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 SQSTM1Q13501 440 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 DGKZQ13574 1117 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 RASGRF1Q13972 1273 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 TCEA2Q15560 299 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 RTN1Q16799 776 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 FOXD4L6Q3SYB3 417 aaPredicted RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 BRDTQ58F21 947 aaPredicted RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 FOXD4L3Q6VB84 417 aaPredicted RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 C11orf96Q7Z7L8 435 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 WDR75Q8IWA0 830 aaKnown RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 GPR152Q8TDT2 470 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 NGLY1Q96IV0 654 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 SRRTQ9BXP5 876 aaKnown RBP6.5□□□□□ -1.37
CDKL3-210ENST00000523832 PNMA2Q9UL42 364 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 ATP8A1Q9Y2Q0 1164 aa6.5□□□□□ -1.37
CDKL3-210ENST00000523832 CDC14CA4D256 554 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 WDHD1O75717 1129 aaPredicted RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 STAU1O95793 577 aaKnown RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 KRT18P05783 430 aaKnown RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 CNGA1P29973 690 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 GBP2P32456 591 aaPredicted RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 HIRAP54198 1017 aaPredicted RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 HLTFQ14527 1009 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 RNFT1Q5M7Z0 435 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 SV2AQ7L0J3 742 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 ZNF296Q8WUU4 475 aaPredicted RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 SCYL1Q96KG9 808 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 TMEM74Q96NL1 305 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 GNL3LQ9NVN8 582 aaKnown RBP6.49□□□□□ -1.37
CDKL3-210ENST00000523832 PLAAQ9Y263 795 aa6.49□□□□□ -1.37
CDKL3-210ENST00000523832 SERTM1A2A2V5 107 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 MINDY4BA8MYZ0 360 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 SMAD7O15105 426 aaKnown RBP6.48□□□□□ -1.37
CDKL3-210ENST00000523832 RLBP1P12271 317 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 PMLP29590 882 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 EPHB1P54762 984 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 NFE2Q16621 373 aaPredicted RBP6.48□□□□□ -1.37
CDKL3-210ENST00000523832 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 NXPE4Q6UWF7 544 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 LYSMD3Q7Z3D4 306 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 SAMD3Q8N6K7 520 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 THAP3Q8WTV1 239 aaPredicted RBP6.48□□□□□ -1.37
CDKL3-210ENST00000523832 TSR2Q969E8 191 aaKnown RBP6.48□□□□□ -1.37
CDKL3-210ENST00000523832 BCO2Q9BYV7 579 aa6.48□□□□□ -1.37
CDKL3-210ENST00000523832 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
CDKL3-210ENST00000523832 TSPAN6O43657 245 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms