RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 SH2B1Q9NRF2 756 aaPredicted RBP8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.23□□□□□ -1.09
NSMCE2-211ENST00000523549 EIF4G1Q04637 1599 aaKnown RBP8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 EPHA1P21709 976 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 ACAD11Q709F0 780 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 CEP41Q9BYV8 373 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 CNTN3Q9P232 1028 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 SALL4Q9UJQ4 1053 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 NACADO15069 1562 aa8.22□□□□□ -1.09
NSMCE2-211ENST00000523549 COL17A1Q9UMD9 1497 aaPredicted RBP8.21□□□□□ -1.09
NSMCE2-211ENST00000523549 KIAA1324LA8MWY0 1029 aaPredicted RBP8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 NFKBIEO00221 500 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 DHX15O43143 795 aaKnown RBP8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 ADAM11O75078 769 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 UVSSAQ2YD98 709 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 KRTAP19-1Q8IUB9 90 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 FOXD4L4Q8WXT5 416 aaPredicted RBP8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 KLHDC7BQ96G42 594 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 CARD10Q9BWT7 1032 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 SEPT3Q9UH03 358 aa8.21□□□□□ -1.1
NSMCE2-211ENST00000523549 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
NSMCE2-211ENST00000523549 CDC25BP30305 580 aa8.2□□□□□ -1.1
NSMCE2-211ENST00000523549 MCTP1Q6DN14 999 aa8.2□□□□□ -1.1
NSMCE2-211ENST00000523549 NCAPG2Q86XI2 1143 aa8.2□□□□□ -1.1
NSMCE2-211ENST00000523549 ZDHHC13Q8IUH4 622 aa8.2□□□□□ -1.1
NSMCE2-211ENST00000523549 COBLO75128 1261 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 TGFB1P01137 390 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 PTPRAP18433 802 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 NFIAQ12857 509 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 DUOXA2Q1HG44 320 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 ATCAYQ86WG3 371 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 WNT8BQ93098 351 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 MYRFLQ96LU7 910 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 SEC31BQ9NQW1 1179 aa8.19□□□□□ -1.1
NSMCE2-211ENST00000523549 RNF43Q68DV7 783 aa8.18□□□□□ -1.1
NSMCE2-211ENST00000523549 FAM117BQ6P1L5 589 aa8.18□□□□□ -1.1
NSMCE2-211ENST00000523549 PBXIP1Q96AQ6 731 aa8.18□□□□□ -1.1
NSMCE2-211ENST00000523549 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
NSMCE2-211ENST00000523549 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 C1orf127Q8N9H9 656 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 UBASH3BQ8TF42 649 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 GGNBP2Q9H3C7 697 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 OSGEPQ9NPF4 335 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 DZANK1Q9NVP4 752 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 KANSL3Q9P2N6 904 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 ERCC6Q03468 1493 aa8.17□□□□□ -1.1
NSMCE2-211ENST00000523549 HMX2A2RU54 273 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 H3BRJ5 948 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 RPLP1P05386 114 aaKnown RBP8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 ACPPP15309 386 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 ATP2B4P23634 1241 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 ZNF438Q7Z4V0 828 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 CLEC10AQ8IUN9 316 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 FAM20CQ8IXL6 584 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 FAM83CQ9BQN1 747 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 ZMYND15Q9H091 742 aa8.16□□□□□ -1.1
NSMCE2-211ENST00000523549 ADAMTS4O75173 837 aa8.15□□□□□ -1.1
NSMCE2-211ENST00000523549 EDEM1Q92611 657 aa8.15□□□□□ -1.1
NSMCE2-211ENST00000523549 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
NSMCE2-211ENST00000523549 SPINK2P20155 84 aa8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 DBNDD2Q9BQY9 259 aa8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 GOLGA2P5Q9HBQ8 144 aa8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 SOX13Q9UN79 622 aa8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 OAS3Q9Y6K5 1087 aaKnown RBP8.14□□□□□ -1.11
NSMCE2-211ENST00000523549 PDE2AO00408 941 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 TRPA1O75762 1119 aa8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 PDGFAP04085 211 aa8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 CES1P23141 567 aa8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 ANKRD34AQ69YU3 496 aa8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 HHIPQ96QV1 700 aa8.13□□□□□ -1.11
NSMCE2-211ENST00000523549 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 MZF1P28698 734 aaPredicted RBP8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 PREPP48147 710 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 GP2P55259 537 aaKnown RBP8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 CABP4P57796 275 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 NOM1Q5C9Z4 860 aaKnown RBP8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 HGSNATQ68CP4 663 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 DTX1Q86Y01 620 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 TMEM102Q8N9M5 508 aaPredicted RBP8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 PMEPA1Q969W9 287 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 KRTAP9-9Q9BYP9 154 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 KRTAP9-4Q9BYQ2 154 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 RNF208Q9H0X6 261 aa8.12□□□□□ -1.11
NSMCE2-211ENST00000523549 A6NHS1 94 aa8.11□□□□□ -1.11
NSMCE2-211ENST00000523549 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
NSMCE2-211ENST00000523549 BMP3P12645 472 aa8.11□□□□□ -1.11
NSMCE2-211ENST00000523549 DNM1Q05193 864 aaKnown RBP8.11□□□□□ -1.11
NSMCE2-211ENST00000523549 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
NSMCE2-211ENST00000523549 SOX1O00570 391 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms