RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
PVT1-217ENST00000523190 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
PVT1-217ENST00000523190 CIZ1Q9ULV3 898 aaPredicted RBP8.17□□□□□ -1.1
PVT1-217ENST00000523190 MINPP1Q9UNW1 487 aa8.17□□□□□ -1.1
PVT1-217ENST00000523190 EP400Q96L91 3159 aa8.17□□□□□ -1.1
PVT1-217ENST00000523190 COL11A2P13942 1736 aaPredicted RBP8.16□□□□□ -1.1
PVT1-217ENST00000523190 ANP32AP39687 249 aaKnown RBP8.16□□□□□ -1.1
PVT1-217ENST00000523190 PHKA1P46020 1223 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 SCARF1Q14162 830 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 RBM17Q96I25 401 aaKnown RBP8.16□□□□□ -1.1
PVT1-217ENST00000523190 TBC1D32Q96NH3 1257 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 ESYT1Q9BSJ8 1104 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 C22orf23Q9BZE7 217 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 IL25Q9H293 177 aa8.16□□□□□ -1.1
PVT1-217ENST00000523190 KLRG2A4D1S0 409 aaPredicted RBP8.15□□□□□ -1.1
PVT1-217ENST00000523190 WTIPA6NIX2 430 aaPredicted RBP8.15□□□□□ -1.1
PVT1-217ENST00000523190 GOLIM4O00461 696 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 UBE4AQ14139 1066 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 NBR1Q14596 966 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 CCDC102BQ68D86 513 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 PI16Q6UXB8 463 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.15□□□□□ -1.1
PVT1-217ENST00000523190 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
PVT1-217ENST00000523190 BRIP1Q9BX63 1249 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 DIAPH3Q9NSV4 1193 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 PAG1Q9NWQ8 432 aa8.15□□□□□ -1.1
PVT1-217ENST00000523190 RFX7Q2KHR2 1363 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 SGSM2O43147 1006 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 ARID4AP29374 1257 aaPredicted RBP8.14□□□□□ -1.11
PVT1-217ENST00000523190 HOXA10P31260 410 aaPredicted RBP8.14□□□□□ -1.11
PVT1-217ENST00000523190 PDE6BP35913 854 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 MCAMP43121 646 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 ZAP70P43403 619 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 KCNJ4P48050 445 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 BCAMP50895 628 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 FKBP4Q02790 459 aaKnown RBP eCLIP8.14□□□□□ -1.11
PVT1-217ENST00000523190 NMIQ13287 307 aaPredicted RBP8.14□□□□□ -1.11
PVT1-217ENST00000523190 TPRNQ4KMQ1 711 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 CWC27Q6UX04 472 aaKnown RBP8.14□□□□□ -1.11
PVT1-217ENST00000523190 KBTBD3Q8NAB2 608 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 FAM227BQ96M60 508 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 CRAMP1Q96RY5 1269 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 ANKRD2Q9GZV1 360 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 ANTXR1Q9H6X2 564 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 ANO2Q9NQ90 1003 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 LRRC37AA6NMS7 1700 aa8.14□□□□□ -1.11
PVT1-217ENST00000523190 A0A0D9SFI3 127 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 HIP1O00291 1037 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 PPEF1O14829 653 aaPredicted RBP8.13□□□□□ -1.11
PVT1-217ENST00000523190 EIF5BO60841 1220 aaKnown RBP8.13□□□□□ -1.11
PVT1-217ENST00000523190 REC8O95072 547 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 CHGBP05060 677 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 UQCRFS1P1P0C7P4 283 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 SRGNP10124 158 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 NPR1P16066 1061 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 KLRK1P26718 216 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 GYG1P46976 350 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 GPSM2P81274 684 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 RUFY2Q8WXA3 655 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 ZNF512BQ96KM6 892 aaPredicted RBP8.13□□□□□ -1.11
PVT1-217ENST00000523190 USP26Q9BXU7 913 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 HMG20BQ9P0W2 317 aa8.13□□□□□ -1.11
PVT1-217ENST00000523190 C10orf71Q711Q0 1435 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 ZNF804BA4D1E1 1349 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 XDHP47989 1333 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 RAD50Q92878 1312 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 AKAP11Q9UKA4 1901 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 BBOX1O75936 387 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 ZBTB7AO95365 584 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 CYP2E1P05181 493 aaPredicted RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 CHRNA5P30532 468 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 RASGRF1Q13972 1273 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 GSE1Q14687 1217 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 SLFNL1Q499Z3 407 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 GPR101Q96P66 508 aaPredicted RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 SEC62Q99442 399 aaKnown RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 ANKIB1Q9P2G1 1089 aa8.12□□□□□ -1.11
PVT1-217ENST00000523190 IQSEC3Q9UPP2 1182 aaPredicted RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 COL1A1P02452 1464 aaPredicted RBP8.12□□□□□ -1.11
PVT1-217ENST00000523190 MED23Q9ULK4 1368 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 CACNA1SQ13698 1873 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 IRS2Q9Y4H2 1338 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 UFL1O94874 794 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 R3HDM1Q15032 1099 aaKnown RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 CAVIN4Q5BKX8 364 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 CCDC129Q6ZRS4 1044 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 ZNF589Q86UQ0 364 aaPredicted RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 SPATA5Q8NB90 893 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 ZNF622Q969S3 477 aaKnown RBP eCLIP8.11□□□□□ -1.11
PVT1-217ENST00000523190 FAM84BQ96KN1 310 aaPredicted RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 LSG1Q9H089 658 aaKnown RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 PIH1D3Q9NQM4 214 aaKnown RBP8.11□□□□□ -1.11
PVT1-217ENST00000523190 LEMD3Q9Y2U8 911 aa8.11□□□□□ -1.11
PVT1-217ENST00000523190 LTBP1Q14766 1721 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms