RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 UBAP1LF5GYI3 381 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 SMNDC1O75940 238 aaKnown RBP eCLIP6.76□□□□□ -1.33
PCM1-214ENST00000521338 CDC25BP30305 580 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 FZD5Q13467 585 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 CEP120Q8N960 986 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 PRIMPOLQ96LW4 560 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 ADAM19Q9H013 955 aa6.76□□□□□ -1.33
PCM1-214ENST00000521338 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
PCM1-214ENST00000521338 CYP2E1P05181 493 aaPredicted RBP6.75□□□□□ -1.33
PCM1-214ENST00000521338 HOXA10P31260 410 aaPredicted RBP6.75□□□□□ -1.33
PCM1-214ENST00000521338 PREPP48147 710 aa6.75□□□□□ -1.33
PCM1-214ENST00000521338 FAM69CQ0P6D2 419 aa6.75□□□□□ -1.33
PCM1-214ENST00000521338 C16orf46Q6P387 395 aa6.75□□□□□ -1.33
PCM1-214ENST00000521338 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.75□□□□□ -1.33
PCM1-214ENST00000521338 POP1Q99575 1024 aaKnown RBP6.75□□□□□ -1.33
PCM1-214ENST00000521338 PBX4Q9BYU1 374 aa6.75□□□□□ -1.33
PCM1-214ENST00000521338 A6NJR5 290 aa6.74□□□□□ -1.33
PCM1-214ENST00000521338 BMP3P12645 472 aa6.74□□□□□ -1.33
PCM1-214ENST00000521338 CAPN12Q6ZSI9 719 aa6.74□□□□□ -1.33
PCM1-214ENST00000521338 BEND4Q6ZU67 534 aa6.74□□□□□ -1.33
PCM1-214ENST00000521338 PIK3R5Q8WYR1 880 aa6.74□□□□□ -1.33
PCM1-214ENST00000521338 SWI5Q1ZZU3 235 aa6.73□□□□□ -1.33
PCM1-214ENST00000521338 SPACA7Q96KW9 195 aa6.73□□□□□ -1.33
PCM1-214ENST00000521338 SEC31BQ9NQW1 1179 aa6.73□□□□□ -1.33
PCM1-214ENST00000521338 PRMT3O60678 531 aa6.72□□□□□ -1.33
PCM1-214ENST00000521338 CDCA8Q53HL2 280 aa6.72□□□□□ -1.33
PCM1-214ENST00000521338 ZMYND15Q9H091 742 aa6.72□□□□□ -1.33
PCM1-214ENST00000521338 NOVA2Q9UNW9 492 aaKnown RBP6.72□□□□□ -1.33
PCM1-214ENST00000521338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.72□□□□□ -1.33
PCM1-214ENST00000521338 ACIN1Q9UKV3 1341 aaKnown RBP6.72□□□□□ -1.33
PCM1-214ENST00000521338 WDR64B1ANS9 1081 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 NFKBIEO00221 500 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 ZBTB39O15060 712 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 SCNN1AP37088 669 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 ZAP70P43403 619 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 TTC39BQ5VTQ0 682 aaPredicted RBP6.71□□□□□ -1.34
PCM1-214ENST00000521338 ANKRD34AQ69YU3 496 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 FAM117BQ6P1L5 589 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 NFXL1Q6ZNB6 911 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 WNT8BQ93098 351 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 ABI2Q9NYB9 513 aaPredicted RBP6.71□□□□□ -1.34
PCM1-214ENST00000521338 FAM13BQ9NYF5 915 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 ZMIZ1Q9ULJ6 1067 aa6.71□□□□□ -1.34
PCM1-214ENST00000521338 H3BRJ5 948 aa6.7□□□□□ -1.34
PCM1-214ENST00000521338 PTPRAP18433 802 aa6.7□□□□□ -1.34
PCM1-214ENST00000521338 RNF208Q9H0X6 261 aa6.7□□□□□ -1.34
PCM1-214ENST00000521338 KCNF1Q9H3M0 494 aa6.7□□□□□ -1.34
PCM1-214ENST00000521338 FNDC3AQ9Y2H6 1198 aaKnown RBP6.7□□□□□ -1.34
PCM1-214ENST00000521338 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
PCM1-214ENST00000521338 MEGF11A6BM72 1044 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 RFX1P22670 979 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 PIP4K2BP78356 416 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 MSMPQ1L6U9 139 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 CBLL1Q75N03 491 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 GPR152Q8TDT2 470 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 MFSD14AQ96MC6 490 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 PIM2Q9P1W9 311 aa6.69□□□□□ -1.34
PCM1-214ENST00000521338 SART1O43290 800 aaKnown RBP6.68□□□□□ -1.34
PCM1-214ENST00000521338 F13BP05160 661 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 PRKCSHP14314 528 aaPredicted RBP6.68□□□□□ -1.34
PCM1-214ENST00000521338 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
PCM1-214ENST00000521338 TMEM63CQ9P1W3 806 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 CNTN3Q9P232 1028 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 SALL4Q9UJQ4 1053 aa6.68□□□□□ -1.34
PCM1-214ENST00000521338 ACPPP15309 386 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 NLRP12P59046 1061 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 JAG1P78504 1218 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 ELOAQ14241 798 aaKnown RBP6.67□□□□□ -1.34
PCM1-214ENST00000521338 NAA30Q147X3 362 aaPredicted RBP6.67□□□□□ -1.34
PCM1-214ENST00000521338 COL19A1Q14993 1142 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 SGO2Q562F6 1265 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 NCAPG2Q86XI2 1143 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 RUSC1Q9BVN2 902 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 STIM2Q9P246 746 aa6.67□□□□□ -1.34
PCM1-214ENST00000521338 PRNPP04156 253 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 MAP4P27816 1152 aaKnown RBP6.66□□□□□ -1.34
PCM1-214ENST00000521338 PDE12Q6L8Q7 609 aaKnown RBP6.66□□□□□ -1.34
PCM1-214ENST00000521338 OGFOD2Q6N063 350 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 MKNK1Q9BUB5 465 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 KRTAP4-9Q9BYQ8 210 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 DZANK1Q9NVP4 752 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 KANSL3Q9P2N6 904 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
PCM1-214ENST00000521338 FOSL1P15407 271 aa6.65□□□□□ -1.34
PCM1-214ENST00000521338 STK32AQ8WU08 396 aa6.65□□□□□ -1.34
PCM1-214ENST00000521338 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.34
PCM1-214ENST00000521338 TRPA1O75762 1119 aa6.64□□□□□ -1.35
PCM1-214ENST00000521338 TIAF1O95411 115 aa6.64□□□□□ -1.35
PCM1-214ENST00000521338 SRPK2P78362 688 aaKnown RBP6.64□□□□□ -1.35
PCM1-214ENST00000521338 FDX2Q6P4F2 183 aa6.64□□□□□ -1.35
PCM1-214ENST00000521338 XKR5Q6UX68 686 aa6.64□□□□□ -1.35
PCM1-214ENST00000521338 HHIPQ96QV1 700 aa6.64□□□□□ -1.35
PCM1-214ENST00000521338 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms