RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 RAB11FIP4Q86YS3 637 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 CCDC144CPQ8IYA2 1237 aa13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 IPO9Q96P70 1041 aaKnown RBP13.93□□□□□ -0.18
PCDHGB6-201ENST00000520790 BCAMP50895 628 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 NOD1Q9Y239 953 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 TULP4Q9NRJ4 1543 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 ITPK1Q13572 414 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 KRT26Q7Z3Y9 468 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 TMC4Q7Z404 712 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 DBNDD2Q9BQY9 259 aa13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 INO80Q9ULG1 1556 aaPredicted RBP13.92□□□□□ -0.18
PCDHGB6-201ENST00000520790 CATIPQ7Z7H3 387 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 GRAPQ13588 217 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 GRAPLQ8TC17 118 aaPredicted RBP13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 PRM3Q9NNZ6 103 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 PAG1Q9NWQ8 432 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 TNNQ9UQP3 1299 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 USP17L8P0C7I0 530 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 ARHGAP45Q92619 1136 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
PCDHGB6-201ENST00000520790 TGFBRAP1Q8WUH2 860 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 SOS1Q07889 1333 aaPredicted RBP13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 EVI5LQ96CN4 794 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 SLC12A7Q9Y666 1083 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 CROCC2H7BZ55 1655 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 MBD4O95243 580 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 SP4Q02446 784 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 MROH5Q6ZUA9 1318 aa13.9□□□□□ -0.18
PCDHGB6-201ENST00000520790 CAPN15O75808 1086 aa13.9□□□□□ -0.19
PCDHGB6-201ENST00000520790 CARMIL3Q8ND23 1372 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 DRC7Q8IY82 874 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 ARID3AQ99856 593 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 DCCP43146 1447 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 PPRC1Q5VV67 1664 aaKnown RBP13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 ZFYP08048 801 aaPredicted RBP13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 USP17L3A6NCW0 530 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 USP17L4A6NCW7 530 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 CEBPZQ03701 1054 aaKnown RBP13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 USP17L1Q7RTZ2 530 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
PCDHGB6-201ENST00000520790 PRDM1O75626 825 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 MATR3P43243 847 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 CKAP2LQ8IYA6 745 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 BICD2Q8TD16 824 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 LEMD3Q9Y2U8 911 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 MICU3Q86XE3 530 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 ATP6V1DQ9Y5K8 247 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 SASH1O94885 1247 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 LIG1P18858 919 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 KRT32Q14532 448 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 LMTK2Q8IWU2 1503 aa13.88□□□□□ -0.19
PCDHGB6-201ENST00000520790 NRDCO43847 1150 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 UPF3BQ9BZI7 483 aaKnown RBP13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 ARHGEF10LQ9HCE6 1279 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 GPHNQ9NQX3 736 aaPredicted RBP13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 MIGA2Q7L4E1 593 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 ESR2Q92731 530 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 HOMER2Q9NSB8 354 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 LRRC24Q50LG9 513 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 PRR5LQ6MZQ0 368 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
PCDHGB6-201ENST00000520790 CSPP1Q1MSJ5 1256 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 B4DLN1 442 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 GBP4Q96PP9 640 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 NPC1L1Q9UHC9 1359 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 ARMT1Q9H993 441 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 NSMFQ6X4W1 530 aa13.86□□□□□ -0.19
PCDHGB6-201ENST00000520790 CCDC196A0A1B0GTZ2 297 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 KIF5BP33176 963 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 IREB2P48200 963 aaKnown RBP13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 SPATA5Q8NB90 893 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 SNAP23O00161 211 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 CSRNP1Q96S65 589 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 CDKL5O76039 1030 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 PDE4AP27815 886 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 PAF1Q8N7H5 531 aa13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
PCDHGB6-201ENST00000520790 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
PCDHGB6-201ENST00000520790 TXLNAP40222 546 aa13.84□□□□□ -0.19
PCDHGB6-201ENST00000520790 PTF1AQ7RTS3 328 aa13.84□□□□□ -0.19
PCDHGB6-201ENST00000520790 ANKRD44Q8N8A2 993 aa13.84□□□□□ -0.19
PCDHGB6-201ENST00000520790 PLSCR1O15162 318 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms